Roseomonas mucosa: FOB66_18450
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Entry
FOB66_18450 CDS
T06208
Symbol
soxR
Name
(GenBank) redox-sensitive transcriptional activator SoxR
KO
K13639
MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
Organism
rmuc
Roseomonas mucosa
Brite
KEGG Orthology (KO) [BR:
rmuc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rmuc03000
]
FOB66_18450 (soxR)
Transcription factors [BR:
rmuc03000
]
Prokaryotic type
Helix-turn-helix
MerR family
FOB66_18450 (soxR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MerR-DNA-bind
MerR
MerR_1
HTH_IclR
HTH_17
Motif
Other DBs
NCBI-ProteinID:
QET94571
LinkDB
All DBs
Position
4:3242180..3242758
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AA seq
192 aa
AA seq
DB search
MDEDRRRGSAPSRRDGPAEGPGGGPRHEPGATRGGQPAVLGVGEVARRSGIAVSTVHFYE
SKGLIEGWRSEGNQRRYPRAVLRRIAIIRIAQRAGIPLATIRAALADLPHDHMPNAADWA
RFSAAWRAMLQARIDGLVQLRDQLTRCIGCGCLSLAECPLRNPGDRLGAQGAGPRFLLGD
GEDAPEGEREGD
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggaccggcgacggggttccgcgccttcccggagggacggcccggcggagggg
cccgggggtggaccgcggcatgaaccgggcgccacgcggggcgggcagcccgccgtgctg
ggggtcggcgaggtggcgcggcgcagcgggatcgccgtctccaccgtgcatttctacgaa
tccaaggggctgatcgagggctggcgcagcgagggcaaccagcggcgctatcccagggcg
gtgctgcggcggatcgccatcatccgcatcgcgcagcgggcggggattccgctcgccacg
atccgtgcggcgctggcggacctgccgcacgaccatatgcccaatgcggcggactgggcg
cgtttcagcgccgcctggcgggccatgctgcaggcgcggatcgacggtctggtgcagctg
cgcgaccagttgacccggtgcatcggctgcggatgcctgtcgctggcggaatgcccgctc
cgcaatccgggggaccggctgggcgcgcagggggcggggccgcgattcctgctgggcgac
ggggaagacgcccctgagggagagcgggagggggattga
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