Roseomonas mucosa: FOB66_19840
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Entry
FOB66_19840 CDS
T06208
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
rmuc
Roseomonas mucosa
Pathway
rmuc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rmuc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FOB66_19840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rmuc03021
]
FOB66_19840
03019 Messenger RNA biogenesis [BR:
rmuc03019
]
FOB66_19840
Transcription machinery [BR:
rmuc03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
FOB66_19840
Messenger RNA biogenesis [BR:
rmuc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FOB66_19840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_22
OB_RNB
AAA_25
S1CSD-TOTE-2
AAA
NACHT
Spore_III_AA
ATPase_2
AAA_14
GpA_ATPase
Motif
Other DBs
NCBI-ProteinID:
QET94805
LinkDB
All DBs
Position
4:complement(3570093..3571376)
Genome browser
AA seq
427 aa
AA seq
DB search
MHLSELKAKSPGDLLAFAESLEIENASSLRKQDIMYAILKNLAEKDQAIHGDGTLEILPD
GFGFLRSPQANFLPGPDDIYVSPTQVRRFGLRTGDTVEGQIRAPKDGERYFALLKVEAIN
FEPPEALKHRINFDNLTPLYPTRRLRMENAELEAAQANNKGPTKDNTHRVIDLVAPIGMG
QRALIVAPPRTGKTVMLQNIAKSISANHPEVFLMVLLIDERPEEVTDMARTVRGEVVAST
FDEPATRHVQVTEMVLEKAKRLVEHKRDVVILLDSITRLGRAYNSVVPSSGKVLTGGVDA
NALQRPKRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNCEIVLDRKLSD
KRVFPAIDITKSGTRKEEVLVERSTLSKMWVLRRILNPMGTQDAMEFLLDKLKYSKSNQD
FFDAMNT
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgcatctttccgaactgaaggccaagagccccggcgaccttctcgctttcgccgagtcg
cttgagatcgagaacgcctcctccctgcgcaagcaggatatcatgtatgccattctcaag
aacctggccgagaaagaccaggcgatccacggggatggcacgctggagatcctgcccgac
ggcttcggcttcctccgcagcccgcaggccaacttcctgcccgggcccgacgacatctac
gtctcccccacgcaggtgcgccgcttcggcctgcgcaccggcgacacggtggaaggccag
atccgggcgccgaaggatggcgagcgctacttcgccctgctgaaggtcgaggcgatcaac
ttcgagccgcccgaggcgctcaagcaccgcatcaacttcgacaacctcacgccgctctac
ccgacccggcgcctgcggatggagaatgccgagttggaggccgcccaggccaacaacaag
ggtcccaccaaggacaacacccaccgggtcatcgaccttgtggcgccgatcggcatgggc
cagcgcgccctgatcgtggcgccgccgcgcaccggcaagacggtgatgctgcagaacatc
gccaagtcgatctcggccaaccatccggaagtcttcctgatggtgctgctgatcgacgag
cgtccggaggaggtcaccgacatggcccgcaccgtgcgcggcgaggtcgtggcctccacc
ttcgacgaacccgccacccgccacgtgcaggtgacggagatggtgctggagaaggcgaag
cgcctggtcgagcacaagcgcgacgtggtgatcctgctggactccatcacccgcctgggc
cgtgcctacaactccgtggtgccgtcctcgggcaaggtgctgaccggcggcgtggacgcc
aacgccctgcagcgcccgaagcgcttcttcggcgccgcgcgcaacatcgaggaaggcggc
tcgctgaccatcatcgccacggcgctgatcgacacgggttcgcgcatggacgaggtgatc
ttcgaggagttcaagggcaccggcaactgcgagatcgtgctggaccgcaagctctccgac
aagcgcgtcttcccggcgatcgacatcaccaagtccggcacccgcaaggaagaggtcctg
gtggagcgttccaccctgtccaagatgtgggtgctgcgccgcatcctgaacccgatgggc
acgcaggacgcgatggagttccttctggacaagctgaagtacagcaagtccaaccaggat
ttcttcgacgcgatgaatacctga
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