Roseomonas mucosa: FOB66_21235
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Entry
FOB66_21235 CDS
T06208
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rmuc
Roseomonas mucosa
Pathway
rmuc03030
DNA replication
rmuc03410
Base excision repair
rmuc03420
Nucleotide excision repair
rmuc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rmuc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FOB66_21235 (polA)
03410 Base excision repair
FOB66_21235 (polA)
03420 Nucleotide excision repair
FOB66_21235 (polA)
03440 Homologous recombination
FOB66_21235 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rmuc03032
]
FOB66_21235 (polA)
03400 DNA repair and recombination proteins [BR:
rmuc03400
]
FOB66_21235 (polA)
Enzymes [BR:
rmuc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FOB66_21235 (polA)
DNA replication proteins [BR:
rmuc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
FOB66_21235 (polA)
DNA repair and recombination proteins [BR:
rmuc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
FOB66_21235 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FOB66_21235 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
NYN_YacP
HHH_5
Beta-prop_NOL10_N
Motif
Other DBs
NCBI-ProteinID:
QET95684
LinkDB
All DBs
Position
4:complement(3886225..3889041)
Genome browser
AA seq
938 aa
AA seq
DB search
MPGAAGGVPATPPGERHLILVDGSGYIFRAFHALPPMTNPEGVPVNAVFGFSGMLSNFLS
RHVGSHIAVVFDASRSTFRNEIYPDYKAHRPEPPPELVPQFKMIREATAAFGVACVEQQG
YEADDMIASYAAAFARDGGRVTIVSSDKDLMQLVDERVELLDPIKQKPIRAAEVMEKFGV
PPEKVVEVQALAGDPTDNVPGVPGIGVKTAAQLIETYGDVETLLSRLSEIRQPKRRQTLE
ENAENARISRRLVELDRNAPLPHPVEEFVTRPPEPARLSGFLERNGFRSLQHRLGLSQDG
LRDSGPRRPPAALEAPVPAEPLAVPAEAAPFGPYETIADLATLEAWIARAREAGVVAVDT
ETDSLDALAANLVGVCLAVAPGQAAYLPLRHASGDLLQPAPQQVPFDEAIALLRPLLAEP
GMLKVLHNAKYDTEVLARPENGGLTVDPVDDTMLLSYSLDAGRHGHGMDELSRRHLAHQP
VTYDEVTGTGRARKPFAQVPLEQATAYAAEDADVTLRLWLALKPLLRERRALALYEQVER
RMIAVLRDMETAGIKVDGEELARIGEDFSQRMTALEAEIHGLAGRAFNVGSPKQLGDILF
GEMGLPGGRKGKTGAYSTDVFVLEELAAQGHELPRKVLDWRQLSKLKSTYVDGLQAQIAA
DGRVHTDFSMAITSTGRLSSTEPNLQNIPIRTEEGAKIRRAFVAEPGHVLLAADYSQIEL
RLLAHMADVPTLREAFSKGEDIHTRTAREIFRLPEGAPVDRELRRRAKTVNFGIIYGISA
FGLGPRLGISPGEARGIIDAYFTQYPGIRDAMEKIKEEARIHGFVRTSFGRALWIPDITA
KQAQIRANAERQAINAPFQGGAAEIIKRAMVRMPLALREAGLSARMLLQVHDELLFEVPE
GEVEATATLVREVMEGVATLHVPLSVEVGTGHSWAEAH
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgccgggggcggcgggcggcgtgccggccaccccgccgggcgagcggcacctgatcctg
gtggacgggtcgggctacatcttccgcgccttccacgccctgccaccgatgaccaatccg
gagggcgtgccggtgaacgccgtcttcggcttctccggcatgctgtcgaacttcctgtcc
cggcatgtgggcagccatatcgccgtggtcttcgacgcctcccgcagcaccttccgcaac
gagatctaccccgactacaaggcgcaccggcccgagccgccgccggagctggtgccccag
ttcaagatgatccgcgaggccacggcggccttcggcgtcgcctgcgtggagcagcagggc
tacgaggcggacgacatgatcgcctcctatgccgccgccttcgcgcgggatggcgggcgg
gtgacgatcgtctcctccgacaaggacctgatgcagctcgtggacgagcgcgtcgagctg
ctggacccgatcaagcagaagccgatccgcgccgccgaggtgatggagaagttcggcgtg
ccgccggagaaggtggtcgaggtgcaggccctggccggggaccccaccgacaacgtgccg
ggcgtgccgggcatcggcgtgaagaccgccgcgcagctgatcgagacctatggggacgtg
gagacgctgctttcccgcctgtccgagatcaggcagcccaagcgccgccagacgctggag
gagaatgcggagaacgcccgcatcagccgccggctggtggagctggaccgcaacgccccc
ctgccgcacccggtggaggaattcgtcacccggccgcccgagccggcgcggttgagcggc
ttcctggagcgcaacggcttccgctcgctgcagcatcggctggggctgagccaggacggc
ctgcgcgacagcggcccccgtcgcccgccggccgcgctggaggcgccggttcccgccgaa
ccgctggcggtgccggccgaggccgcgcccttcggcccctacgagaccatcgccgatctc
gcaacgctggaagcctggatcgcgcgggcgcgcgaggccggggtggtggcggtggacacg
gagacggacagcctggacgcgctggcggccaatctggtgggcgtctgccttgcggtcgcg
ccggggcaggcggcctacctgccgctgcgccatgcctcgggcgacctgttgcagccggcg
ccgcagcaggtgcctttcgacgaggcgattgccctgctgcgcccgcttctggccgagccc
ggcatgctgaaggtgctgcacaacgcgaaatacgacaccgaggtgctggcccggccggag
aatggcggcctcacggtcgatccggtggacgacacgatgctgctttcctacagtctcgat
gccgggcggcacgggcatgggatggacgagctgtcgcgccggcatctggcgcaccagccg
gtcacctatgacgaggtgaccggcaccggcagggcgcgcaagccctttgcccaggtgccg
ctggagcaggccaccgcctatgccgcggaggatgcggatgtcacgctgcgcctctggctg
gcgctgaagccgcttttgcgcgaacgccgggcgctggccctctacgagcaggtcgagcgt
cgcatgatcgccgtgctgcgcgacatggaaaccgccggcatcaaggtggacggcgaggag
ctggcgcggatcggcgaggacttctcccagcgcatgacggcgctggaggcggagatccac
ggcctcgccggccgcgccttcaatgtcggctcccccaagcagctcggcgatatcctgttc
ggcgagatgggcctgcccggcggccgcaagggaaagaccggcgcctattccaccgacgtc
ttcgtgctggaggagctggcggcccagggccacgagctgccccgcaaggtgctggactgg
cggcagctctcgaagctgaaatccacctatgtggacgggctgcaggcgcagatcgccgcc
gatggccgggtccatacggatttcagcatggccatcacctccaccggccggctttcctcc
accgagcccaacctgcagaacatccccatccgcaccgaggaaggcgccaagatccgccgc
gccttcgtggcggagccggggcatgtcctgctggcggcggattattcgcagatcgagctg
cggctgctggcccacatggccgacgtgccgacgctgcgggaggccttcagcaagggcgag
gacatccacacccgcacggcgcgggagatcttccgcctgccggaaggggcgccggtggac
cgcgagctgcgccgccgtgccaagacggtgaatttcggcatcatctacggcatctcggcc
ttcggcctggggccgcggcttggcatctccccgggcgaggcgcgggggatcatcgacgcc
tatttcacgcagtatccgggcatccgcgacgcgatggagaagatcaaggaggaggcccgc
atccacggcttcgtccgcacctccttcggccgggcgctgtggattcccgacatcaccgcc
aagcaggcgcagatccgcgccaatgccgagcggcaggcgatcaacgcccccttccaggga
ggggctgcggagatcatcaagcgcgccatggtccgcatgccgctggcactgcgcgaggcc
ggactctcggcgcgcatgctgctgcaggtgcatgacgagttgctcttcgaggtgccggag
ggtgaggtcgaggcgacggcgacgctggtgcgggaggtgatggagggtgtggcgaccttg
catgtccccctgtccgtcgaggtcgggacgggacattcctgggccgaggcgcactga
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