Ralstonia nicotianae: GO999_05690
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Entry
GO999_05690 CDS
T09041
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rnc
Ralstonia nicotianae
Pathway
rnc03420
Nucleotide excision repair
rnc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rnc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GO999_05690
03430 Mismatch repair
GO999_05690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rnc03400
]
GO999_05690
Enzymes [BR:
rnc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GO999_05690
DNA repair and recombination proteins [BR:
rnc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GO999_05690
MMR (mismatch excision repair)
Other MMR factors
GO999_05690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
Viral_helicase1
AAA_30
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QUP58091
LinkDB
All DBs
Position
1234236..1236620
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AA seq
794 aa
AA seq
DB search
MSELLAHLNPEQRAAVTLPDESALILAGAGSGKTRVLTTRIAWLIQSARVSPSGVLAVTF
TNKAAKEMTARLSAMLPINTRGMWIGTFHGLCNRLLRAHYRDAGLPQTFQILDTQDQLSA
VKRLLKSLNIDDEKFPPKNVQYFINGAKEQGLRAGDLEIANEFDRRMADLYAAYDAQCQR
EGVVDFSELLLRCYELLRYNDAIRAHYQRRFKHILVDEFQDTNRLQYAWLKILAGLGEAG
VTPNAIFAVGDDDQSIYAFRGANVGNMVDFEREFRVAHRIKLEQNYRSHGNILDTANHLI
AHNTRRLGKNLRTDAGHGEPVRVYPSATDGQEAGWIVEEIRERIASGTARSEIAILYRSN
AQSRVIEHALFSVGIPYKVYGGLRFFERAEIKHALAYLQLLENPDNDAAFGRVVNFPARG
VGARSLEQLQDAAKLYGVSLAASVPYLTGAAGTKLAAFVRLIEQMRADTRQMTLPEIVQH
VIHASGLITHYQGEKEGLDRIENLQELVTAAQAFVAEEGYGVDAIATALPMRHDAMLRIE
GGETDSDAVTELVADETPTEMTPLVAFLTHASLEAGDNQAQAGQDAVQLMTVHAAKGLEF
HVVFITGLEEGLFPHENSLLDTDGLEEERRLMYVAITRARERLYLSFAQSRVLHGQIRYH
IRSRFFDELPEATLKWLTPQHTGYSPTRRAQGGQGMQGDSAWGREWFKRPERGDNEAYTG
RPTGGMDTGNTYADTKRAAGTGFRVGQSVFHNKFGEGVITTLEGEGADARAHIKFSRHGV
KVLALGIAKLDPIN
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaactgctcgctcacctgaaccccgaacaacgcgccgccgtcacgcttcccgac
gagtcggcgctgatcctggccggggcgggcagcggcaagacgcgcgtgctgaccacccgc
atcgcctggctgatccagagcgcccgggtgtcgccgtcgggtgtgctggccgtcaccttt
accaacaaggcggccaaggagatgaccgcccggctgtccgccatgctgccgatcaacacg
cgcggcatgtggatcggcaccttccacggcctgtgcaaccggctgctgcgcgcgcactac
cgcgacgccgggctgccgcagaccttccagatcctcgatacgcaagaccagctctcggcc
gtcaagcgcctgctcaagtcgctgaacatcgacgacgagaagtttccgccgaagaacgtc
cagtacttcatcaatggcgccaaggaacagggcctgcgcgcaggcgacctggagatcgcc
aatgagttcgaccgccgcatggccgacctgtacgctgcctacgatgcgcagtgccagcgc
gaaggcgtggtcgatttttcagagctgctgctgcgctgctatgagctgctgcgttacaac
gatgcgatccgcgcgcactaccagcggcgcttcaagcacatcctggtcgacgagttccag
gacaccaaccgcctgcaatacgcctggctgaagatcctggccggcctgggcgaggcgggc
gtcacgcccaacgccatcttcgccgtgggcgacgacgaccagagcatctacgccttccgt
ggcgccaacgtcggcaacatggtggacttcgagcgcgaattccgtgtcgcgcaccgcatc
aagctggagcagaactaccgttcgcacggcaacatcctggacacggccaaccacctgatc
gcccacaacacccgccgcctgggcaagaacctgcgcaccgacgccggccacggcgagccg
gtgcgcgtctacccgtccgccaccgacgggcaggaggccggctggatcgtcgaagaaatc
cgcgagcgcatcgccagcggcacggcgcgttccgagatcgccatcctgtatcgcagcaac
gcgcagtcgcgggtgatcgagcatgcgttgttctcggtgggtattccctacaaggtgtat
ggcgggctgcgcttcttcgagcgcgccgaaatcaagcacgcgctggcctacctgcaactg
ctggagaaccccgacaacgatgccgccttcggccgcgtggtcaacttcccggcgcgcggc
gtcggggcgcggtcgctggagcagctgcaggatgcggccaagctgtatggcgtgtcgctg
gcggcgtcggtgccgtacctgaccggcgcggcggggacgaagctggcggcgttcgtgcgg
ctgatcgagcagatgcgcgccgacacgcgccagatgacgctgcccgagatcgtccagcac
gtgatccacgccagcggcctcatcacgcattaccagggcgagaaggaaggtctcgaccgc
atcgagaacctgcaggaactggtgaccgccgcccaggccttcgtggccgaggagggctac
ggcgtcgatgccatcgccaccgcgctgccgatgcgccacgacgcgatgctgcgcatcgag
ggcggcgagacggacagcgatgccgtcaccgagctggtcgccgatgaaacgccgacggag
atgaccccgctggtcgccttcctgacgcatgcctcgctggaggccggcgacaaccaggca
caggccggccaggacgcggtgcaactgatgaccgtgcacgccgccaaggggttggagttc
cacgttgtcttcattaccggcctggaggagggcctgttcccgcacgagaacagcctgctg
gacaccgacggcctggaagaagagcgtcgcctgatgtacgtggccatcacccgggcgcgc
gagcgcctgtacctgtcgtttgcacagagccgcgtgctgcacgggcagatccgctaccac
attcgctcgcgcttcttcgacgagctgccggaagccacgctgaagtggctgacgccgcag
cataccggctacagccccacgcgtcgcgcgcagggcgggcagggcatgcagggcgatagc
gcctggggccgcgagtggttcaagcgccccgagcgcggcgacaacgaggcctacaccggc
cgcccgaccggcggcatggacaccggcaacacctacgccgacaccaagcgcgcggccgga
acgggtttccgcgtcggccagtcggtgttccacaacaagttcggggaaggcgtcatcacg
acgctggaaggcgagggcgccgatgcgcgcgcccacatcaagttcagccgccacggcgtg
aaggtgctggcgctgggcatcgccaagctggacccgatcaactga
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