Ralstonia nicotianae: GO999_05715
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Entry
GO999_05715 CDS
T09041
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rnc
Ralstonia nicotianae
Pathway
rnc03030
DNA replication
rnc03410
Base excision repair
rnc03420
Nucleotide excision repair
rnc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rnc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GO999_05715 (polA)
03410 Base excision repair
GO999_05715 (polA)
03420 Nucleotide excision repair
GO999_05715 (polA)
03440 Homologous recombination
GO999_05715 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rnc03032
]
GO999_05715 (polA)
03400 DNA repair and recombination proteins [BR:
rnc03400
]
GO999_05715 (polA)
Enzymes [BR:
rnc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GO999_05715 (polA)
DNA replication proteins [BR:
rnc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
GO999_05715 (polA)
DNA repair and recombination proteins [BR:
rnc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
GO999_05715 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GO999_05715 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
QUP58096
UniProt:
A0ABX7ZRR8
LinkDB
All DBs
Position
1239991..1242825
Genome browser
AA seq
944 aa
AA seq
DB search
MSESQETLLLVDGSSYLYRAYHALPDLRNGEGFPTGAIYGIVNMLRKLRNDYPAKYSACV
FDAKGKTFRDELYPAYKEHRAPMPDDLRQQIEPIHEAVRALGWPILMVDGVEADDVIGTL
AERAAREGIRTVVSTGDKDLAQLVNDHVTLVNTMSNETLDPAGVLAKFGVPPGKIVDYLS
LIGDTVDNVPGVPKVGPKTAVKWLGEYGSLDSVIARAGEIKGVVGENLRNTLDWLPKGRE
LLTVKTDCDLATEVPTFEALVDGGEDRAKLVDFFGRYGFKTWLREASGESLPDTRSVGAA
RKAATPVKQYAPEAAAQPQASLFDVEAPPAEVKYETVTTEAQLESWMRLLDASELVCIDT
ETTSIDPMLAQLVGLSLSVEPGQACYIPVAHRGPDVSGLDAAGQLSREAVLARMKPWLED
AARKKVGQHLKYDAHVFANHGIALRGIAHDTMLQSYVLASHRNHGMDALAERVLHLKTIT
YEEVCGKGASQIGFDEVPLDRATEYAAEDADITLRLHRALYPKVAEDDKLRYVYEQIEMP
TSIVLQKMERNGVLIDAERLARQSTGLGQRLLELEQQAYALAGQPFNLNSPKQIGEIFFT
QLKLPVIKKTASGAPSTDEEVLQKLAEDYPLPKLLLDFRGLAKLKSTYTDKLPKMVNPQT
GRVHTTYGQATAVTGRLASTDPNLQNIPVRTEEGRRIREAFVAPAGSVIVSADYSQIELR
IMAHLSEDEGLLRAFREGQDVHRATAAEVFGVTPLEVTAEQRRYAKVINFGLIYGMSAFG
LASNLGIGRDAAKLYIDRYFARYPGVARYMDETRLVAHERGYVETVFGRRLWLPDINGGN
GPRRQAAERAAINAPMQGTAADLIKLSMLAVQDWLDGSPSASKPGAPMRTRQVMQVHDEL
VLEVPQEELSLVRERLPELMCGVASLRVPLVAEVGVGANWEEAH
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaaagtcaagaaacgctattgctcgtcgatggctcgagttatctgtaccgtgct
tatcacgcactgcccgacttgcgcaatggagaagggtttcctaccggggccatctacggc
atcgtgaacatgctgcgcaagctgcgcaacgactacccggccaagtatagcgcttgcgtt
ttcgacgctaaaggcaagaccttccgcgacgaactgtaccccgcctacaaggagcaccgg
gcgccgatgcccgatgacctgcgccagcagatcgagccgatccacgaagccgtgcgcgcg
ctcggctggcccatcctgatggtcgacggcgtggaggccgacgacgtgatcggcacgctg
gccgaacgcgccgcccgggagggcatccgcaccgttgtctcgaccggcgacaaggacctc
gcccaactggtgaacgaccatgtcacgctggtcaacaccatgagcaacgagacgctcgat
ccggccggcgtgctggccaagttcggcgtgccgcccgggaagatcgtcgattacctgtcg
ctgatcggtgacaccgtggacaatgtgccgggcgtgcccaaggtcggcccgaagacggcg
gtcaagtggctgggcgaatacggctcgctcgacagcgtgatcgcccgcgccggcgagatc
aagggcgtggtcggcgagaacctgcgcaacacgctcgactggctgcccaagggccgcgag
ctgctgaccgtgaagaccgactgcgatctcgccacggaagtcccgaccttcgaggccctc
gtcgatggcggcgaggatcgcgccaagctggtcgacttcttcggccgctacggcttcaag
acctggctgcgcgaggccagcggcgaatcgctgccggatacccgcagcgtgggcgcggcg
cgcaaggccgccacgcccgtcaagcaatacgcaccggaggccgcggcgcagccgcaggcc
agcctgttcgacgtcgaagcgccgccggccgaggtcaaatacgaaaccgtcaccaccgaa
gcgcagctcgaatcgtggatgcggttgctggatgcgtccgaactggtctgcatcgacacc
gagaccacctcgatcgatccgatgctggcgcagctggtgggcctttcgctgtcggtcgag
ccgggccaggcgtgctacatcccggtcgcgcatcgcggccccgatgtgtcggggctggac
gccgccgggcagctctcacgcgaggccgtgctggcgcgcatgaaaccgtggctggaggac
gcggcccgcaagaaggtcggccagcatctgaagtacgacgcgcacgtgttcgccaaccat
ggcatcgcactgcgcggcatcgcgcacgacaccatgctgcagtcgtacgtgctggcctcg
caccgcaaccacggcatggacgcgctggccgagcgcgtgctgcacctgaagaccatcacc
tacgaagaggtctgcggcaagggcgcgtcgcagatcggcttcgatgaggtgccgctcgac
cgcgccacagaatacgccgccgaggacgccgacatcacgctgcgcctgcaccgcgcgctg
tatcccaaggtggccgaggacgacaagctgcgctacgtctacgagcagatcgagatgccg
acctccatcgtgctgcagaagatggagcgcaacggcgtgctgatcgatgccgagcgcctg
gccagacagagcaccgggctgggccagcgcctgctggagctcgagcagcaggcctatgcg
ctggccggccagccgttcaatctgaactcgcccaagcagatcggcgagatcttcttcacg
cagctcaagctgccggtcatcaagaagaccgccagcggtgcgccgtcgaccgacgaagag
gtgctgcagaagctggccgaggactacccgctgcccaagctgctgctcgatttccgcggc
ctggccaagctcaagtccacctataccgacaagctgccgaagatggtcaatccgcagacc
ggccgggtccacaccacctacgggcaggcgaccgccgtcacgggccggctggcctcgacc
gacccgaacctgcagaacatcccggtgcgcacggaagaagggcggcgcatccgcgaagcg
ttcgtcgcgccggcgggcagcgtgatcgtctcggccgactactcgcagatcgagctgcgc
atcatggcccacctgtccgaggacgaaggcctgttgcgcgccttccgcgagggccaggac
gtgcaccgcgccaccgcggccgaagtcttcggtgtgacgccgctggaggtcacggccgaa
cagcgccgctacgccaaggtcatcaacttcggcctcatctacggcatgagcgcgttcggg
ctggcgagcaacctcggcatcggccgcgacgccgccaagctctatatcgaccggtatttc
gcgcgctatcccggcgtggcccgctacatggacgagacccgcctggtcgcgcacgaacgc
ggctacgtcgagacggtgttcggccgccgcctgtggctgcccgacatcaacggcggcaac
ggcccgcgccgccaggccgccgagcgcgccgccatcaatgcgcccatgcagggcaccgcc
gccgacctcatcaagctgtcgatgctggccgtgcaggactggctggatggctcgcccagc
gccagcaagcccggcgcgccgatgcgcacgcgccaggtcatgcaggtgcacgatgaactg
gtgctggaagtcccgcaggaagagctgtcgctggtgcgcgagcgcctgcccgagctgatg
tgcggcgtggcgtcgctgcgtgtgccgctggtggccgaggtgggcgtcggcgcgaactgg
gaagaggcgcactga
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