Ralstonia nicotianae: GO999_13955
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Entry
GO999_13955 CDS
T09041
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rnc
Ralstonia nicotianae
Pathway
rnc00061
Fatty acid biosynthesis
rnc00071
Fatty acid degradation
rnc01100
Metabolic pathways
rnc01212
Fatty acid metabolism
rnc02024
Quorum sensing
rnc04146
Peroxisome
Module
rnc_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rnc00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
GO999_13955
00071 Fatty acid degradation
GO999_13955
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
GO999_13955
09145 Cellular community - prokaryotes
02024 Quorum sensing
GO999_13955
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rnc01004
]
GO999_13955
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rnc04147
]
GO999_13955
Enzymes [BR:
rnc01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
GO999_13955
Lipid biosynthesis proteins [BR:
rnc01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
GO999_13955
Exosome [BR:
rnc04147
]
Exosomal proteins
Exosomal proteins of breast milk
GO999_13955
Exosomal proteins of breast cancer cells
GO999_13955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DUF4235
Motif
Other DBs
NCBI-ProteinID:
QUP59561
UniProt:
A0ABX7ZW24
LinkDB
All DBs
Position
3041090..3042826
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AA seq
578 aa
AA seq
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MTTAAERSRLADRIWLQSYPEGVPAEIDPERYRSLVEVFRESVLKYRGRAAYVSIGTEMT
YGECETLATRFAAWLQACGVRKDDRVAIMLPNSLQYPVCLFGTLLAGAIVVNVNPLYTAS
ELAHQLRDSGAQTIVVLENFARTLEQALPGTGVRNIVLTGIGDLLGGALNLKGRALNFAM
RHMRKQVPPHRLPSPIRLRDALAEGGTHALQPVPLGPQDIAFLQYTGGTTGVAKGAMLTH
RNIVANLQQAEVWSQGMLSGEVQTNVTLLPLYHIFSLTVNLLMLMTLGGRNILIANPRDT
RRVLFLLRRERFSCIAGVNTLFNALLEDPGFARRDFSAMKITIGGGMAVQRAIAQRWKQV
TGHTIVEGYGLTECSPVVTMNPPDIAELTGSIGLPMPSTEVRFMRDDGSSAPVGEPGELQ
VRGPQVMHGYWQRAEETARAMSTDGWFSTGDIGVMDARGYIRLIDRKKDMILVSGFNVYP
NEIEDVIALHPDMLEVAAIGVPDPVAGERVKVIVVPRGDALTEAALLAHCRAHLTGYKVP
RFVEFRREGLPKSAVGKILRRALRDSDPDIQRARAARA
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccgctgccgaacgcagccgcctggccgaccgcatctggctgcagtcgtacccc
gagggcgtgccggcggagatcgaccccgagcgctaccgctcgctggtcgaggtgttccgc
gaatcggtgctgaagtaccgcggccgcgccgcctatgtcagcatcggcaccgagatgacc
tacggcgaatgcgagacgctggccacgcgcttcgccgcctggctgcaggcgtgcggcgtg
cgcaaggacgaccgcgtggcgatcatgctgcccaacagcctgcaatatccggtatgcctg
ttcggcacgctgctggccggcgccatcgtggtcaacgtcaatccgctctacaccgcgtcg
gagcttgcgcaccagttgcgcgactcgggcgcgcagaccatcgtggtgctggagaacttc
gcccgcacgctggagcaggcgctgccgggcaccggcgtgcgcaacatcgtgctcaccggc
atcggcgacctgctgggcggcgccctcaacctcaagggccgcgcgctgaacttcgcgatg
cgccacatgcggaagcaggtgccgccgcaccgcctgccctcgccgatccggctgcgcgac
gccctggccgaaggcggcacgcacgcgctgcagccggtgccgctcggcccgcaggacatc
gccttcctgcaatacaccggtggcaccaccggcgtggccaagggggcaatgctgacccac
cgcaacatcgtcgccaacctgcagcaggccgaggtgtggtcccagggcatgctgtcgggc
gaggtgcagaccaacgtcacgctgctgccgctctatcacatcttctcgctcacggtgaac
ctgctgatgctcatgaccctgggcgggcgcaatatcctgatcgccaatccgcgcgacacc
cggcgggtgctgttcctcctgcgccgcgagcggttctcgtgcatcgcgggcgtcaacacg
ctgttcaacgcgctgctggaggatcccgggttcgcccggcgcgatttctcggccatgaag
atcaccatcggcggcggcatggcggtgcagcgggccatcgcccagcgctggaaacaggtg
accggccacactatcgtagagggctatggactcacggagtgctcgccagtggtgacaatg
aacccgcccgacatcgccgagctcaccggctcgatcgggctgccgatgccgtccaccgag
gtgcgcttcatgcgcgacgacggcagcagcgcgccggtgggcgagccgggcgaactgcag
gtgcgcggcccgcaggtgatgcacggctactggcagcgcgccgaagagaccgccagggcg
atgagcaccgacggctggttctccaccggcgacatcggcgtgatggacgcgcgcggctac
atccgcctgatcgaccgcaagaaggacatgattctggtctccggcttcaacgtgtacccc
aacgagatcgaagacgtgatcgcactgcaccccgacatgctggaagtggccgccatcggg
gtgcccgacccggtggccggcgagcgcgtgaaggtcatcgtggtgccgcgcggcgatgcg
ctcaccgaagccgccctgctggcgcactgccgcgcccacctgaccggctacaaggtgccg
cgcttcgtcgagttccgccgcgagggcctgcccaagtcggccgtcggcaagatcctgcgc
cgcgcgctgcgcgacagcgatccggacatccagcgcgcccgcgctgcccgggcctga
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