Ralstonia pseudosolanacearum RS: GO999_14635
Help
Entry
GO999_14635 CDS
T09041
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
rnc
Ralstonia pseudosolanacearum RS
Pathway
rnc02020
Two-component system
rnc02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
rnc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GO999_14635
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
GO999_14635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rnc03021
]
GO999_14635
Transcription machinery [BR:
rnc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GO999_14635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_38
DUF2344
HTH_IclR
HTH_23
Motif
Other DBs
NCBI-ProteinID:
QUP59684
LinkDB
All DBs
Position
3182528..3184027
Genome browser
AA seq
499 aa
AA seq
DB search
MKQSLQLRLSQHLALTPQLQQSIRLLQLSTIELQQEVEQALTENPLLERENEWLDTSARI
GADGSVNALQSSSATPLPTESPPPAANGADHADTADASYENGSDFDSDYGTERSDWSLDD
FARKPQSDEDDRAPMQLREAEPTQREFLMEQLAPLKLSPRDKGLVIFLIESLDDEGYLTG
SLDEILADLPAELEVELDELQAALRMLQSFDPAGIGARSAAECLTLQLQRLDSPAKPLAL
TIVNQHLELLAARDYTRLKKALSVDDGELKAAHELIRSLAPFPGHAFGRAEADFVVPDVV
VRKTAAGWMAQLNPDVMPRLRINDMYAQILRSSRGESGAANLQQKLQEARWLIKNIQQRF
DTILRVSQAIVERQKSFFTHGEIAMRPLVLREIADTLGLHESTISRVTTNKYMATPMGTF
ELKYFFGSHVSTETGGAASSTAIRALIKQLVGAEDPKNPLSDSRIAELLGEQGFVVARRT
VAKYREALKIPAVNLRKSL
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagtcgctccagctccgtctctcccagcatctggcgctcacgccacaactgcag
cagtcgatccggctgctgcagttgtcgaccatcgagctgcaacaggaagtcgagcaggcg
ctgaccgagaacccgctgctcgagcgcgagaacgagtggctcgacacctccgcgcgcatc
ggcgccgacggctcggtcaacgccctgcagagcagcagcgccaccccgctgccgaccgaa
tcgccgccgcccgccgccaacggtgcggaccatgccgacacagccgacgcatcgtacgaa
aacggcagcgatttcgacagcgactacggcaccgagcggtccgactggagcctcgacgac
ttcgcgcgcaaaccccagtccgacgaagacgaccgcgcgccgatgcagctgcgcgaggcc
gaacccacgcagcgcgaattcctgatggaacaactcgcgccgctcaagctgtccccgcgc
gacaagggcctcgtcatcttcctgatcgaatcgctggacgacgaaggctacctgaccggc
tcgctcgatgagatcctcgccgacctgccggccgaactcgaggtcgagctcgacgaattg
caggccgcgctgcggatgctgcagagcttcgatccggccggcatcggtgcgcgctcggcg
gccgaatgcctgacgctgcagctgcagcgcctggactccccggccaagccgctggcgctg
accatcgtcaaccagcatctcgaactgctcgccgcgcgcgactacacgcggctgaagaaa
gcgctgtccgtcgatgatggcgagctgaaggccgcgcatgagctgatccgctcgctggcg
ccctttcctggccacgccttcgggcgggccgaggccgacttcgtcgtgcccgacgtggtg
gtgcgcaagaccgccgccggctggatggcacagctgaaccccgacgtgatgccacgcctg
cgcatcaacgacatgtatgcgcagatcctgcgcagcagccgtggcgaatcgggtgccgcc
aacctgcagcagaagctgcaggaagcgcgctggctgatcaaaaatatccagcagcgcttc
gacaccatcctgcgtgtctcgcaagcaattgtcgaacgtcaaaagagctttttcacgcac
ggtgaaatcgccatgcgccccttggttttgcgggaaatagccgatacactgggtctacac
gagtccacgatctcccgtgtgacgaccaacaaatacatggcaacccccatggggaccttc
gagctgaagtacttcttcggcagccatgtatcgacggaaaccggcggggccgcgtcatcc
accgcgatacgcgcgctcatcaagcaacttgtaggagccgaagacccgaagaatcctctg
tccgatagcagaattgccgagctgttaggcgaacaaggattcgtggtggcccgtcggacg
gtggccaagtaccgcgaagccctcaagatcccagcagtgaatctgcgcaagtctttatag
DBGET
integrated database retrieval system
