Ralstonia pseudosolanacearum RS: GO999_15980
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Entry
GO999_15980 CDS
T09041
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
rnc
Ralstonia pseudosolanacearum RS
Pathway
rnc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rnc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GO999_15980 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rnc03400
]
GO999_15980 (xth)
Enzymes [BR:
rnc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
GO999_15980 (xth)
DNA repair and recombination proteins [BR:
rnc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
GO999_15980 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
QUP59929
LinkDB
All DBs
Position
complement(3454482..3455267)
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AA seq
261 aa
AA seq
DB search
MLRIISANLNGVRSAASKGFFEWMGKQDADFVCVQELKCAQDDMTPEFLAPHGYHGVFQH
AVKKGYSGAGLYARHQPDDVIVGFDGGEFDAEGRYVEARYGKLSIISVYVPSGSSGEERQ
QAKYRFMDLFMQHLTDLRHEKGREVVLCGDVNIVHKEIDIKNWKGNQKNSGCLPEERAWL
TRLFDEVGYVDVFRTLDPRPEQYTWWSNRGQAYAKNVGWRIDYQIATPGIAATARSTSIF
RDIKFSDHAPLTVDYDAKLHG
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgttacgcatcatttccgccaacctcaacggcgtccgctccgccgccagcaagggcttt
ttcgaatggatgggcaagcaggacgccgacttcgtctgcgtgcaggaactgaaatgcgcg
caggacgacatgaccccggaattcctggcgccgcacggctaccacggcgtgttccagcat
gccgtcaagaagggctatagcggcgcgggcctgtacgcgcggcatcagccggacgacgtg
atcgtcggcttcgacggcggcgagttcgatgccgagggccgctacgtcgaggcgcgctac
ggcaagctgtcgatcatctcggtctacgtgccgtccggctccagcggcgaggagcgccag
caggccaagtaccgcttcatggacctgttcatgcagcacctgaccgacctgcgccacgag
aagggccgcgaggtcgtcctgtgcggcgacgtcaacatcgtccacaaggaaatcgacatc
aagaactggaagggcaaccagaagaactccggctgcctgcccgaggagcgcgcatggctg
acccggctgttcgacgaggtcggctacgtggatgtcttccgcacgctggacccgcgcccc
gagcagtacacctggtggagcaaccgcggccaggcctacgcaaagaacgtcgggtggcgc
atcgactaccagatcgccacgccgggcatcgccgccacggcgcgcagcacgtcgatcttc
cgggacatcaagttcagcgaccatgccccgctgacggtcgactacgacgccaagctgcac
gggtaa
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