Ralstonia nicotianae: GO999_15995
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Entry
GO999_15995 CDS
T09041
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
rnc
Ralstonia nicotianae
Pathway
rnc00300
Lysine biosynthesis
rnc00470
D-Amino acid metabolism
rnc01100
Metabolic pathways
rnc01110
Biosynthesis of secondary metabolites
rnc01120
Microbial metabolism in diverse environments
rnc01230
Biosynthesis of amino acids
Module
rnc_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rnc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GO999_15995 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GO999_15995 (dapF)
Enzymes [BR:
rnc01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
GO999_15995 (dapF)
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Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
QUP59932
UniProt:
A0ABX7ZWV5
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All DBs
Position
complement(3456980..3457858)
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AA seq
292 aa
AA seq
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MKLHFTKMHGAGNDFVVLDGIATPIDFTPEQWRAIADRHFGVGADQLLLVERSTRPDVDF
RYRIFNHDGGEVEQCGNGARCFVKFVTDRGLTDKRTIRVEVMNGIATLTMQPDGQVTVDM
GAPVFEAARLPFVPDALPTRVEGRDTQHALQINGRAAWLSTVSMGNPHAVQVVDDAEAFP
VLEDGPLIESHAVFPRRVNAGFMEIADRHAIRLRVYERGAGETLACGTGACAAAVAGIRR
GLLDSPVKVTTHGGDLTIAWAGEGEPVMMTGPATTVFEGTLDLDALKQTAAH
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgcacttcaccaagatgcacggcgccggcaacgacttcgtcgtgctcgacggc
atcgcgaccccgatcgatttcacccccgaacagtggcgcgccatcgccgaccgccacttc
ggcgtgggcgcagaccaactgctgctggtggagcgctccacccgccccgacgtcgatttc
cgctaccgcatcttcaaccacgacggcggcgaggtggagcagtgcggcaacggcgcgcgc
tgcttcgtcaagttcgttaccgaccgtggtctgaccgacaagcgcaccatccgcgtcgaa
gtgatgaacggcatcgccacgctgacgatgcagcccgacggccaggtgacggtcgacatg
ggcgccccggtgttcgaggccgcgcgcctgcccttcgtgcccgatgccctgcccacccgc
gtggaaggccgcgacacgcagcacgccctgcagatcaacggccgcgccgcgtggctgtcc
accgtgtcgatgggcaacccgcacgcggtgcaggtggtcgatgacgcggaagccttcccg
gtgctggaagacggcccgctgatcgagtcgcacgctgtgtttccgaggcgcgtgaatgcc
ggcttcatggagatcgccgaccgccacgccatccgcctgcgcgtgtacgagcgcggcgcc
ggcgagacgctggcctgtggcacgggcgcctgcgcggcggcggtggcggggatccggcgc
ggcctgctggattcgcccgtcaaggtgaccacgcacggcggcgacctgaccatcgcctgg
gccggcgagggcgagccggtgatgatgaccggcccggccacgaccgtgttcgaaggcacg
ctggacctggacgcactgaagcagaccgccgcgcactga
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