Ralstonia nicotianae: GO999_16395
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Entry
GO999_16395 CDS
T09041
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
rnc
Ralstonia nicotianae
Pathway
rnc00550
Peptidoglycan biosynthesis
rnc01100
Metabolic pathways
rnc01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
rnc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GO999_16395 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GO999_16395 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rnc01011
]
GO999_16395 (mrdA)
Enzymes [BR:
rnc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
GO999_16395 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
rnc01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
GO999_16395 (mrdA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
bDLD3
PBP_dimer_2
MucB_RseB
Motif
Other DBs
NCBI-ProteinID:
QUP59998
LinkDB
All DBs
Position
complement(3549118..3551523)
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AA seq
801 aa
AA seq
DB search
MTEIRNVEQELSRFRVRLAAAALFVLVCFGLLLVRFFWLQSVKHEQYSAKAEDNRISVAP
IEPNRGIIMDRNGVVLARNYSAYTLEVTPSKLQDTLDNTIDQLAQVIDIQPRDRRRFKRL
MEDARSFESLPIRSQLTDQEVARFSAQRFRFPGVDVHARLFRQYPLGEAAAHVIGYIGRI
SERDLERIDDMSEANSQPNVTYDPRKDANNYSGTEYIGKVGIEQSYETELHGLTGYEEVE
VSAGGRPIRTLSTSQATPGNNLILSLDINLQRLAEQLFGNRRGALVAIEPETGDILAFVS
KPTFDPNLFIEGIDSATWSELNGSPDKPLLNRPLRGTYPPGSTYKPFMALAALELGKRTP
QWGMADPGSFTLGNHTFRDDAPGGHGWVDMYRSIVVSCDTYYYKLANDMGVNAIHDFMKP
LGFGQVTGIDIEGERTGILPSTEWKRKAYKRPEQQKWYDGETISLGIGQGYNNFTILQLA
HAVATLANNGGVMKPHLVKAVEDSVNKARTLTVPTESYRIPLKQANIDVIKRAMAGVVQA
GTAAKAFAGAQYAAAGKTGTAQVFSLGKGEKYNHHAIPEYKRDHALFEAFAPTDHPKIAV
ALIVENAGFGATSAAPIARAVFDYYLQGKWPAELAAIAPKVQPQPPVDTPSVFSTGKTAT
IASATATPQAAAEAVAQSAALAAAASGEQAADAATVGGASAPGASAVAAGAPRAAPAMSS
DRVAPALREAGTSAQAVAPATLDAQVLQALSHVQPAPDLPSPRGRNLPAAPASAPAASPK
DRKPAVKPNPKPAPKPARAAP
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagatccgcaacgtcgaacaggagctgtcgcgctttcgcgtgcggctggccgcg
gccgcgctgttcgtgctggtgtgcttcgggctgctgctggtgcgcttcttctggctgcag
tcggtcaagcacgagcagtactcggccaaggccgaggacaaccgcatctcggtggcgccg
atcgagcccaaccgcggcatcatcatggaccgcaacggggtggtgctggcgcgcaactac
tcggcctacacgctggaggtcaccccgtccaagctgcaggacacgctggacaacaccatc
gaccagctcgcccaggtgatcgacatccagccgcgcgaccgtcgccgcttcaagcgcctg
atggaagacgcgcgcagcttcgagagcctgccgatccgcagccagctgaccgaccaggag
gtggcgcgcttctcggcacagcgcttccgcttcccgggcgtggacgtgcacgctaggctg
ttccgccagtacccgttgggcgaggcggcggcgcacgtgatcggctacatcggccgcatc
tccgagcgcgacctcgagcgtatcgacgacatgagcgaggccaacagccagcccaacgtc
acctacgatccgcgcaaggacgccaacaactacagcggcaccgagtacatcggcaaggtc
ggcatcgagcagagctacgagaccgagctgcacggcctgaccggctacgaagaagtcgag
gtcagcgcgggcgggcggccgatccgcacgctgtccacctcgcaggccacgcccggcaac
aacctgatcctgtcgctcgacatcaacctgcagcggctggccgagcagctgttcggcaac
cgccgcggcgcgctggtggcgatcgagcccgagaccggcgacatcctcgccttcgtctcc
aagcccaccttcgacccgaacctcttcatcgaaggcatcgacagcgccacctggagcgag
ctgaatggctcgcccgacaagccgctgctgaaccgcccgctgcgcggcacgtatccgccg
ggctcgacctacaagccgttcatggcgctggccgcgctggagctgggcaagcgcacgccg
caatggggcatggctgatcccggctcgttcacgctgggcaaccacaccttccgcgacgac
gcgccgggcggccacggctgggtcgacatgtaccgctccatcgtggtgtcgtgcgacacg
tactactacaagctcgccaacgacatgggcgtcaacgccatccacgatttcatgaagccg
ctcggcttcggccaggtcaccggcatcgacatcgagggcgagcgcaccggcatcctgccc
tccaccgagtggaagcgcaaagcctacaagcgtcccgagcagcagaagtggtacgacggc
gaaaccatctcgctgggcatcggccagggctacaacaacttcaccatcctccagttggcg
catgcggtggcgacgctggccaacaacggcggcgtgatgaagccccacctggtcaaggcc
gtcgaggattccgtcaacaaggcccgcacgctgacggtgccgaccgagagctaccggatt
ccgctcaagcaggccaacatcgacgtgatcaagcgcgcgatggccggggtggtccaggcc
ggcacggcggccaaggcgtttgccggcgcgcaatatgccgcggcgggcaagaccggcacg
gcgcaggtgttctcgctcggcaagggcgagaagtacaaccaccatgccattcccgaatac
aagcgcgaccacgcgctgttcgaggccttcgcgccgaccgaccacccgaagatcgcggtg
gcgctgatcgtcgagaacgccggcttcggcgccacctcggccgcgccgatcgcgcgcgcg
gtgttcgactactacctgcagggcaagtggccggccgagctggcggccatcgcgcccaag
gtccagccgcagccgccggtcgatacgccgagcgtgttctccaccggcaagaccgccacc
atcgccagcgccacggccacgccgcaggcagccgcggaggcggtggcgcagagcgcggcc
ctggccgcggccgcatccggcgagcaggctgccgatgcagccacggtgggcggcgcgtcc
gcgccgggcgcttcggccgtggcggccggcgcaccgcgcgccgcgccggcgatgtcgtcc
gatcgggtcgcgcccgcgctgcgcgaggccggcaccagcgcccaggcggtcgctccggcc
acgctggacgcccaggtgctgcaggcgctgtcgcacgtccagcccgcccccgacctgccg
agcccgcgcggccgcaacctgccggcggcaccggcttccgcgccggccgcctcgcccaag
gaccgcaagcccgcggtcaagcccaatcccaagcctgcgcccaaaccggcacgggccgct
ccctga
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