Ralstonia nicotianae: GO999_16550
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Entry
GO999_16550 CDS
T09041
Symbol
slmA
Name
(GenBank) nucleoid occlusion factor SlmA
KO
K05501
TetR/AcrR family transcriptional regulator
Organism
rnc
Ralstonia nicotianae
Brite
KEGG Orthology (KO) [BR:
rnc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rnc03000
]
GO999_16550 (slmA)
03036 Chromosome and associated proteins [BR:
rnc03036
]
GO999_16550 (slmA)
Transcription factors [BR:
rnc03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
GO999_16550 (slmA)
Chromosome and associated proteins [BR:
rnc03036
]
Prokaryotic type
Chromosome partitioning proteins
Inhibitors of FtsZ assembly
GO999_16550 (slmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SlmA-like_C
TetR_N
TetR_C_13
HTH_11
GP3_package
fvmX1
HTH_20
TetR_C_33
TetR_C_24
HTH_5
TetR
TetR_C_11
Motif
Other DBs
NCBI-ProteinID:
QUP60028
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All DBs
Position
3580938..3581609
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AA seq
223 aa
AA seq
DB search
MSNAQTGFPPAELQPQPQPAAEAPATPATPARKRPRPGERRVQILQTLASMLEQPRGEKI
TTAGLAARLDVSEAALYRHFASKAQMFEGLIEFIEQTVFGLINQITLREEHGLRQAHAIA
HMLLSFADRNPGMTRVLVGDALVGEDERLPERMAQCMDRIEASLKQSLRVAVTQGAWPAD
ADIASRANLIVCVVLGRWHRYAKSGFRRSPVEGAEAQLRVLLG
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacgcgcagacaggctttccgccggccgagctacagccgcagccgcagccagcc
gccgaagcacccgcaacgcccgcaacgcccgcccgcaagcgcccgcgccccggtgagcgc
cgcgtgcagatcctgcagacgctggccagcatgctggagcagccgcgtggcgaaaaaatc
accacggccggtctggccgccaggctggatgtctccgaagccgcgctctaccggcacttc
gccagcaaggcgcagatgttcgaggggctgatcgaattcatcgagcaaaccgtgttcggc
ctgatcaaccagatcacgctgcgcgaagagcacggcctgcgccaggcccacgccatcgcc
cacatgctgctgtcgttcgccgacaggaacccgggcatgacgcgcgtgctggtgggcgac
gcgctggtcggcgaggacgaacgcctgcccgagcgcatggcgcagtgcatggaccgcatc
gaggcctcgctcaagcagagcctgcgcgtggcggtcacgcagggcgcctggccggccgac
gccgacatcgcatcgcgcgccaacctgatcgtctgcgtggtgctggggcgctggcaccgc
tacgccaagagcggcttccgcaggtcgccggtggaaggggcggaggcgcagttgcgggtg
ctgctgggctga
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