Ralstonia pseudosolanacearum RS: GO999_18405
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Entry
GO999_18405 CDS
T09041
Name
(GenBank) type III effector
Organism
rnc
Ralstonia pseudosolanacearum RS
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Gene cluster
GFIT
Motif
Pfam:
LRR_4
LRR_8
LRR_1
LRR_9
DZF_N
Motif
Other DBs
NCBI-ProteinID:
QUP60546
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Position
pRS:complement(462035..464293)
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AA seq
752 aa
AA seq
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MMNNFRQRGLDDLATQARVHSELKRAAGYMKNLQQKGGKELLLTSLPIARLPDAVFNMTQ
LKAIRTEHCDLHELSPALQNLRQLEALSLSGAGKLNALPHAVGQLPSLQELRLVNTGIQA
LPPMGGASALKELTVSNTPLASLPDDLGTLQKLAHLSLSGTQLRELPASAGNMSALQTLS
LRDNKKLSGLPQSLGNLSGLESLTLAGNHIRELPSMREAHSLQELTVDEPSLAKLPPDFG
TRGTLGRLAHLSLSNTKLRELPADLGSLSGLKTLSLQGNQRLEALPQSFGKLSGLEMLSL
VGNRIQSLPSMDGVSALKKLKIDDASLASLPRDFGAQHKMLTNLSLSNTQLRTLPSSIDK
LSHLQELKLNDNAKLSTLPDSLTKMKRLKKLDLSGCKRLESLPQSIGKLATLQELDLRNC
TRLTFAALPYSVRFPRDGLRIHLPDHLKAEVQAERLKANPRAQVLLGDLERKGELMDDAI
FDSRPQLNEGEVISLAYHLKDANDRKPLVQQKAERKGARESDSPLMRQALANLFNVSTDV
GEFERIQNAARSLPAILQRELADLMTAQEGQQLVQSIGEAAYGVRANAALQKELITLAHQ
IASDPVIREVRQRHGRSHLAEKLTPLVEPLWENARALAPMPSDLRKQLTSLLAVEPGRKL
VSEISKEVYSKKHRDEILQDLMPTLAARIESDPRSQEAHRLLNREFSGISPQAQKDGHAM
TMTAIVQDHWNGVLAEAKKQGKAPMVGPSGQH
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacaactttcgccaacggggcctggacgaccttgcgacgcaggcgcgcgtgcat
agcgagctcaaacgtgcggccggctacatgaaaaacctgcagcagaaggggggtaaagag
ctgctactgacatcgctccccatcgccaggctgccagatgccgttttcaacatgacccag
ctgaaggcgatccggacggagcattgcgatctgcacgaattgtcgccggcgctccagaat
ctgcgccaactggaagccttgtctctgagtggtgccggaaaactcaacgcgctgccccac
gccgtcgggcaattgcccagcctgcaagagttgaggctggtcaacacaggcattcaagct
ctgccgcccatggggggggcctctgcgttgaaggagctcacggtgagcaacacaccgctc
gcatcgctgccggacgatctcggcacgctgcaaaagcttgcccatctgtccctgtccggc
acgcagctgcgcgagttgcctgccagcgccggaaacatgtcggcgctgcagaccctatcg
ctgcgggacaacaaaaagctgagcgggctgccccaatcgctgggcaacctgtccggcctg
gaatccctgacactggcaggtaaccacatccgcgaactgccttcgatgcgcgaagcgcat
tccctgcaggagctcacggtggacgagccgtcgcttgcgaagctcccgccagatttcggc
acccgcggcacgctcggcaggcttgcccatctgtcgctgtcgaatacgaaacttcgcgaa
ctgcccgccgatctcgggagcctgtcagggctgaagacgctttccctgcagggcaaccag
aggctggaggccctgccccaatcgttcgggaagctgtccggcctggagatgttgagcctg
gtcggtaaccgcatccaaagcctgccttcgatggacggcgtatcggcgctgaagaagctc
aaaatcgacgatgcgtcgctggcatcgctgccgagagacttcggcgctcagcacaaaatg
ttgacgaatctgtcgctctcgaacacgcagctgcgcacattgccgtccagcatcgacaag
ctgtcgcatctgcaggagctcaagctgaatgacaacgccaagctcagtacattgcccgat
tcgcttacgaagatgaaacggctgaaaaaactggatctgtccggctgcaagcggcttgaa
tcgctgccgcaatcgatcggcaagctggccaccctgcaagagcttgacctgcggaactgt
acacgcctgaccttcgcggcgctgccgtattccgtgcggtttcctcgtgacggactgcgc
atccacttgccggatcacctcaaagcggaggttcaggctgagcgcttgaaggcgaacccg
cgtgcccaagtgctgctcggcgacctggaacgcaaaggcgagctgatggacgacgcgata
ttcgactcgcggccacagctcaatgaaggcgaagtgatctcgctggcctatcatctgaag
gacgcaaacgatcgcaaacctctcgttcagcagaaggcggaacgcaaaggcgcccgagaa
agcgactcgccgctgatgcggcaggcgctggccaatttgttcaacgtctccacggatgtc
ggcgaattcgagcggatacagaacgccgcacgctccctccccgctatcctgcagcgtgaa
ctggccgatctgatgactgcgcaggaggggcaacagctggtccagtcgatcggggaagcc
gcctacggcgtgcgggcaaacgcagcactgcagaaggaattgatcacgctggcgcatcag
attgcctcggatccggtgattcgagaggtgcggcagcgccacggccgctcgcatctcgca
gagaaattgacgccccttgtcgaaccgctctgggagaacgcgcgcgcattggcgccgatg
ccctcggacctgcgcaaacagctgaccagtttgcttgcagtcgagcctggacggaaactg
gtcagcgagatcagcaaggaggtctatagcaagaaacatcgcgatgagatcctgcaagac
ctgatgccgaccctggcagcgcggattgaatcggacccgcggagccaagaggcgcatcgg
ctgctgaaccgcgaattctccggaatctcgccgcaggcacagaaggacgggcacgcgatg
accatgaccgcgatcgttcaggatcattggaacggcgtgctggcggaagcgaaaaaacaa
ggcaaggcgcccatggtcgggccatcgggccagcactga
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