Ralstonia nicotianae: GO999_18430
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Entry
GO999_18430 CDS
T09041
Name
(GenBank) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
rnc
Ralstonia nicotianae
Pathway
rnc00040
Pentose and glucuronate interconversions
rnc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rnc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
GO999_18430
Enzymes [BR:
rnc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
GO999_18430
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Motif
Other DBs
NCBI-ProteinID:
QUP60550
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All DBs
Position
pRS:complement(470936..472525)
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AA seq
529 aa
AA seq
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MSHRYTLIALAAAILSSGAHAAGASVTASWGNVAEPSLPADSAVCKTLAATITPVSGSID
TVDGNPSNSQPDASRIQTAIDNCPAGQAVRLVKGSAGESGFLSGSLKLKSGVTLWIDTGV
TLFASRNPADFDNGVGTCGTATTSNTKSCNALIVARDTVGSGIVGDGIIDGRGGSLVTSG
PNANRLTWWDIAYLNKTKGLNQQNPRLVQLYNGSAFTLYRVTVQNSPNFHIVTTGTAGVT
AWGIKIVTPSLAYTVPGYKCAAGTTPDKVTPATCFTPETVKNTDGFDPGQSTNVVLANSY
ISTGDDHVAIKASGGATRNLLFAHNHFYYGHGLSIGSETDGGVSNMQVTDLAMDGNDSSG
GNGLRIKSDISRGGKVNNIVYNGICMRNVKEPLVFDPFYSTAKGSLYPNFTNIVVKNFHD
LGSAKGIARTMTFLGYEAKKRTNPLTLTLDNVVFDGTQPAFDVAHNGGPASPNGTHFTFG
GNGPVSFANAIVTSTTTDVTVTGTPGTAAAVDCSNAFVPLKSVAPTSPI
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
ttgtctcaccgctacacactcatagcgcttgccgccgcgatcctgtcctccggcgcgcat
gccgccggcgcctccgtcaccgcctcctggggcaacgtggccgaacccagcctgccggcc
gattcggctgtctgcaagacgctggcggccacgatcacgccggtcagcggctccatcgat
acggtggacggcaaccccagcaactcccagcccgacgcgagccgcatccagaccgccatc
gacaactgcccggccggccaggccgtccggctggtgaagggcagcgccggcgagtccggc
ttcctgagcggctcgctcaagctcaagtcgggcgtgacgctgtggatcgataccggcgtg
accctgttcgcctcgcgcaacccggccgactttgacaacggcgtgggcacctgcggcacc
gccaccaccagcaacaccaagtcgtgcaacgcgctgatcgtggcgcgcgacacggtgggc
agcggcatcgtcggcgacggcatcatcgacggccgcggcggcagcctggtcaccagcggc
ccgaacgcgaaccggctcacctggtgggatatcgcctacctgaacaagaccaaggggctg
aaccagcagaacccgcgcctggtccagctgtacaacggcagcgcgttcacgctgtaccgc
gtgacggtgcagaactcgcccaacttccacatcgtcaccaccggcacggcgggcgtgacg
gcatggggcatcaagatcgtgacgccgagcctggcctacaccgtgccgggctacaagtgc
gcggccggcaccacgcccgacaaggtcacgcccgcgacctgcttcacgcccgagacggtc
aagaacaccgacggtttcgatccgggccagtcgaccaatgtggtgctcgccaactcgtac
atcagcaccggcgatgaccacgtcgccatcaaggccagcggcggcgcgacgcgcaacctg
ctcttcgcgcacaaccacttctactatgggcatggcctgtcgatcggcagcgagaccgat
gggggtgtgagcaacatgcaggtgaccgacctggcgatggacggcaacgacagctcgggc
ggcaacggcctgcgcatcaagtccgacatttcgcgcggcggcaaggtcaacaacatcgtc
tacaacggcatctgcatgcgcaacgtcaaggagccgctggtgttcgacccgttctacagc
accgcgaagggctccctctacccgaacttcaccaacatcgtcgtcaagaacttccatgac
ctgggcagcgccaagggcatcgcgcgcacgatgacgttcctgggctatgaagcgaaaaag
cggaccaacccgctgacgctcacgctcgacaacgtggtgttcgacggcacgcagccggcg
ttcgatgtcgcgcacaacggtggccccgcgtcgcccaatggcacgcacttcacgttcggc
ggtaacggtccggtgagcttcgcgaatgccatcgtcacgtcgacgaccaccgatgtgacg
gtgaccggcacgccgggcacggcggcggcggtggattgcagcaatgccttcgtgccgctg
aagtccgtggcaccgacctcgccgatctga
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