KEGG   Ralstonia nicotianae: GO999_22370
Entry
GO999_22370       CDS       T09041                                 
Name
(GenBank) AMP-binding protein
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
rnc  Ralstonia nicotianae
Pathway
rnc00061  Fatty acid biosynthesis
rnc00071  Fatty acid degradation
rnc01100  Metabolic pathways
rnc01212  Fatty acid metabolism
rnc02024  Quorum sensing
rnc04146  Peroxisome
Module
rnc_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:rnc00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    GO999_22370
   00071 Fatty acid degradation
    GO999_22370
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    GO999_22370
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    GO999_22370
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:rnc01004]
    GO999_22370
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rnc04147]
    GO999_22370
Enzymes [BR:rnc01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     GO999_22370
Lipid biosynthesis proteins [BR:rnc01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   GO999_22370
Exosome [BR:rnc04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   GO999_22370
  Exosomal proteins of breast cancer cells
   GO999_22370
SSDB
Motif
Pfam: AMP-binding AMP-binding_C NAD_binding_10 AMP-binding_C_2
Other DBs
NCBI-ProteinID: QUP61240
UniProt: A0ABX8A1F6
LinkDB
Position
pRS:complement(1458935..1460584)
AA seq 549 aa
MERIWHKIYGSDIPSEIDHRRYRSVAQLIQEAVEQYAHLPAFVALGGELAYRDVDRLSRQ
FAAYLQGELGIKKGDRVALMSPNILAFPVAMFGIIRAGAVQVNVNPLYTAHELAHQLADA
DVDTVIVFSGATKTLVEAMESVSIRHVVVAEAGDLGDSPSPRSPLPRELTKFTWFSDAID
AGAGLVFEPVDLNHNDLIYLQYTGGTTGVPKGAALSHGNLIANILQFKSFAPRIFGEGRD
LVITALPLYHIFALMVNCLSFFSAGAKNVLVANPRDIDSLVATFERHRFSIVTGVNTLFA
NLMAHPRIHQIDFSSLRLALGGGSAILKGTSDKWHSLTGQHIKEGFGMSETSPIVTLNPL
HLGDFSETVGIPLPSTDVSLRDDDGHEVAIGEPGELCVRGPQVMRGYWRREEDNATSFWA
DGFLRTGDIAICDANGFIKIVDRRKDMVLVSGFNVFPNEIEAAVASCPGVLESASVGVPD
GKTGEAVHLFVVKEPHAELTEEQIREHCRARLAAYKQPKFVEFVSELPKSAVGKTLRRAL
RSSTTGIET
NT seq 1650 nt   +upstreamnt  +downstreamnt
atggaaagaatttggcacaagatctatggaagcgacattccgtccgagatcgaccatcgc
cgctaccgttcagtcgcacagctcattcaggaggcggtggagcaatacgcgcaccttccg
gcctttgtcgcgctcggtggcgaactcgcctaccgggacgtcgatcgtctgtctcggcag
ttcgcggcctacttgcagggcgagcttggaatcaagaagggggatcgcgtcgcgttgatg
tccccgaatatcttggccttcccggtggccatgttcggcatcatccgcgcgggcgcagtg
caggtgaacgtcaaccccctctacacggcgcatgagcttgcacatcagctggcggatgcg
gacgtcgacacagtcatcgttttttccggagcgacaaaaacactggtcgaagcgatggag
tccgtatcgatccgccatgtcgtcgttgccgaggccggcgaccttggagacagcccctct
ccacgcagcccattgccgcgggagctgaccaaatttacgtggttctctgacgcaatcgat
gcaggcgctggactcgtcttcgagccggtcgacctgaatcacaatgatctgatctatctt
cagtacaccggcggcacgacgggtgtccccaagggagctgctctctcgcacggcaacctc
atcgccaacatcctgcagttcaagtccttcgcgccgcgcattttcggggaaggccgcgat
ctggtgatcactgcgttaccgctgtaccacatctttgcgctgatggtgaactgcctgagc
ttcttttcggcaggcgcaaagaatgtactcgtagccaatccacgcgatatcgattcactc
gtcgcgacttttgagagacatcgcttctccatcgtcacgggcgtcaatactttgttcgcc
aacctgatggcacatccccgaatccatcaaattgacttctcttcccttcgcctggctctt
ggagggggaagtgcaattctgaaagggacttcggacaagtggcactcgctcactggacag
cacatcaaggaggggttcggcatgtcggaaacctccccaatcgtcaccctgaaccctctg
catcttggggacttctcggagaccgttggcattccattgccgtcgaccgatgtgtcattg
cgcgacgatgacggacatgaagtcgcgatcggggagccaggagaactctgtgtgcgcggc
cctcaagtcatgcgcggttactggcgccgtgaagaagacaatgccacgtccttctgggct
gacggttttctacgcaccggtgacattgccatatgcgatgcaaacggattcatcaagatc
gtcgaccgccgaaaggacatggtgctcgtctccggtttcaatgtgtttcccaacgaaatc
gaggccgcggtcgcttcctgtcccggcgttctggagtcagccagcgttggtgttcccgac
ggcaagacaggcgaagcggtgcacttgtttgtcgtcaaggagccgcatgcggagctgact
gaagagcagatccgcgaacactgtcgtgctcgcttggcagcgtacaagcaaccgaagttt
gttgagtttgtttctgagctgccgaagtcagcggttggcaaaacactgcgaagagctttg
cgatcctcgacgacagggatagaaacgtag

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