Rattus norvegicus (rat): 100310874
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Entry
100310874 CDS
T01003
Symbol
Parpbp
Name
(RefSeq) PCNA-interacting partner isoform 3
KO
K27412
PCNA-interacting partner
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rno03400
]
100310874 (Parpbp)
DNA repair and recombination proteins [BR:
rno03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
100310874 (Parpbp)
TLS (translesion DNA synthesis) factors
Other TLS factors
100310874 (Parpbp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
Motif
Other DBs
NCBI-GeneID:
100310874
NCBI-ProteinID:
NP_001160148
RGD:
2314264
Ensembl:
ENSRNOG00000004682
UniProt:
Q9EQ10
LinkDB
All DBs
Position
7:complement(24398897..24468330)
Genome browser
AA seq
492 aa
AA seq
DB search
MKVVDHYEDIRKTYDDFLKNSNTLDLIDVYKKCSIMTSNCEKHMISSIQLRDFLSGTECA
VNDENNPHSPASPVKCSQNDKQVRLLAKKIFLSYLSLLVNSKNDLALAQILNTPDRGLGR
EAFTNLKHAAREKQLSMFLMATSFIRTLELGGKGYAPPPSDPLWAHVKGLSAFVNFIDKL
NEILGEVPNPSLAGGRILSAIRTQLIKGHSSGEPFYKAVEEVVQDLNLRIKNIINSQEGV
TVSATNISPVPPKSFAINHDTAYCGRDAVKILLVLLDEDAASAPTRNKAELLYNDQSTAP
HGGASVLTLFRSPTQVKSTPVKPLRERIHTSLQAEKNKQMRQTLIRSQFACTYKDDCIMS
KSKWNVNSSSKPLSALRLENDVSEGAQPSVGKARLETSSENVHVDRSKDDKGPRKSTKRK
LAKSKQPGVREDIHCDQGDELYQPKNVKILKVPSDSHRKAGGKLAPGARGNRCTTKDKLI
PGQTKLTRFFML
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtggtcgaccactatgaagacattaggaaaacatacgatgatttcttgaagaat
agcaatacactagatctgattgatgtttataaaaaatgtagcatcatgacttctaattgt
gagaaacacatgatatcctctattcaactacgggactttctatctggcacagagtgtgca
gtaaatgatgaaaataatcctcatagcccagcgtcaccagtgaaatgcagccagaatgac
aaacaggtgcggctgttggcaaagaaaattttcctttcgtatttgagcctcttagtgaat
tcaaagaatgacctggctctggctcaaattctcaacacccctgaccgaggactgggaagg
gaggccttcaccaacttgaagcatgctgcccgagagaaacagttgtctatgtttctgatg
gccacatcatttattaggacgttagagctcggagggaaaggatatgcacccccaccatca
gatcctctgtgggcacatgtaaaagggctgtctgcttttgttaatttcattgacaagcta
aatgaaattcttggagaggtaccaaatccaagccttgcgggcggtcggatattatcggcg
ataaggacgcagctgatcaaaggccacagcagcggggagcctttttataaagcagtagag
gaagttgttcaggatttgaatttgaggattaaaaatattattaattctcaagaaggtgta
actgtcagcgccaccaacatcagtcctgtcccgccaaaatcttttgccataaaccatgat
accgcatactgtggaagagatgctgtgaaaattttactggttcttttggatgaagacgca
gccagtgctcctaccagaaataaagcagagcttctgtacaatgaccaaagtacagctcct
cacggtggagcgtctgtccttacactctttaggtctcccacacaagtgaaaagtacacca
gttaaacctctcagagagcgaatccacacgtcactgcaagcagagaaaaataagcagatg
aggcagacattaattagatcacagtttgcttgtacttataaagatgactgcataatgagc
aagagtaaatggaatgttaattcctcatcaaagccgctgtctgctcttcgcttagagaac
gatgtctctgagggagcacagccgtctgttgggaaagccagacttgaaacgagttctgaa
aatgtgcatgtggacagaagtaaggatgacaaaggaccgaggaagtctactaaacggaag
ctagcgaagagcaagcagccgggtgtcagggaggatattcactgcgatcagggagatgag
ctgtaccaacccaagaatgttaagatccttaaagtgcccagtgactctcacaggaaagct
ggtggcaaactagccccaggagcaaggggcaacaggtgcaccaccaaggacaagctgatc
cctggccagaccaagctgacacggttttttatgctataa
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