Rattus norvegicus (rat): 100359512
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Entry
100359512 CDS
T01003
Symbol
Vti1b
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1B
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
100359512 (Vti1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rno04131
]
100359512 (Vti1b)
Membrane trafficking [BR:
rno04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
100359512 (Vti1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE_C
V-SNARE
Sec20
Laminin_II
YqjK
DUF745
OmpH
Snapin_Pallidin
KxDL
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
100359512
NCBI-ProteinID:
NP_001364123
RGD:
2323682
Ensembl:
ENSRNOG00000060436
LinkDB
All DBs
Position
6:complement(103694342..103709544)
Genome browser
AA seq
201 aa
AA seq
DB search
MATSAASSEHFEKLHEIFRGLLEDLQGVPERLLGTAGTEEKKKLVRDFDEKQQEANETLA
EMEEELRYAPLTFRNSMMSKLRNYRKDLAKLHREVRSTPLTATPGGRGDLKFGTYTLENE
HLNRLQSQRALLLQGTESLNRATQSIERSHRIAAETDQIGSEIIEELGEQRDQLERTKSR
LVNTNENLSKSRKILRSMSRK
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atggccacttccgccgcctcctccgagcatttcgagaagctgcacgagatcttccgcggc
ctccttgaagatctacaaggggtgccggagcggctgctgggaaccgcggggaccgaggag
aagaagaagctggtcagagactttgatgaaaagcagcaggaagcaaatgaaacgttggca
gagatggaggaagaactacgatatgcacccctgacttttcgtaactccatgatgtctaag
cttcgaaactaccggaaggaccttgctaaactccaccgtgaggtgagaagtacacctttg
acagccacacctggaggccgaggagacctgaagtttggcacatataccttagagaatgag
catttgaatcggctgcagtctcaaagagcattacttctgcaaggcactgaaagcctgaac
cgagccacccaaagcattgagcgttctcatcggattgccgcagaaactgaccaaattggt
tcagaaatcatagaagagttgggggagcaacgagaccagttggaacgtaccaagagtaga
ctggtaaacacaaatgaaaacttaagcaaaagccgaaagattcttcgctctatgtccaga
aagtaa
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