Rattus norvegicus (rat): 100359642
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Entry
100359642 CDS
T01003
Symbol
Chmp4b
Name
(RefSeq) charged multivesicular body protein 4b
KO
K12194
charged multivesicular body protein 4A/B
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03250
Viral life cycle - HIV-1
rno04144
Endocytosis
rno04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100359642 (Chmp4b)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100359642 (Chmp4b)
09143 Cell growth and death
04217 Necroptosis
100359642 (Chmp4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rno04131
]
100359642 (Chmp4b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rno04147
]
100359642 (Chmp4b)
Membrane trafficking [BR:
rno04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
100359642 (Chmp4b)
Exosome [BR:
rno04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100359642 (Chmp4b)
Exosomal proteins of other body fluids (saliva and urine)
100359642 (Chmp4b)
Exosomal proteins of colorectal cancer cells
100359642 (Chmp4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Snf7
SYF2
Motif
Other DBs
NCBI-GeneID:
100359642
NCBI-ProteinID:
NP_001386586
RGD:
1309846
Ensembl:
ENSRNOG00000046585
LinkDB
All DBs
Position
3:163631054..163671569
Genome browser
AA seq
224 aa
AA seq
DB search
MSVFGKLFGAGGGKAGKGGPTPQEAIQRLRDTEEMLSKKQEFLEKKIEQELTAAKKHGTK
NKRAALQALKRKKRYEKQLAQIDGTLSTIEFQREALENANTNTEVLKNMGYAAKAMKAAH
DNMDIDKVDELMQDIADQQELAEEISTAISKPVGFGEEFDEDELMAELEELEQEELDKNL
LEISGPETVPLPNVPSVALPSKPAKKKEEEDDDMKELENWAGSM
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgttcgggaagctgttcggggctggagggggtaaggcgggcaagggcggcccg
accccccaggaggccatacagcgacttcgggacacggaggaaatgctaagcaagaaacaa
gagtttctggagaagaagatcgagcaggagctgacggctgccaagaagcacggcaccaaa
aataagcgcgcggccttgcaggctctgaagcgcaagaagaggtatgagaagcagctggca
cagattgatggcaccctgtcaaccatcgagttccagcgggaggccctagagaatgccaac
accaacacggaggtgctcaagaacatgggctatgccgccaaggccatgaaggctgcccac
gacaacatggacattgataaagtggatgagttaatgcaggacattgctgaccagcaagaa
cttgcagaagagatttccacagctatctccaaacctgtgggctttggagaagagtttgac
gaggatgagctcatggcagagctggaggaactcgaacaagaggagctagacaagaatttg
ttggagatcagtgggcccgaaacagtccctctaccaaatgtcccctctgtagccctacca
tccaaacccgccaagaagaaggaggaggaagacgacgacatgaaggagttggagaactgg
gcgggatccatgtaa
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