Rattus norvegicus (rat): 100359816
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Entry
100359816 CDS
T01003
Symbol
Setd1b
Name
(RefSeq) histone-lysine N-methyltransferase SETD1B isoform X1
KO
K11422
[histone H3]-lysine4 N-trimethyltransferase SETD1 [EC:
2.1.1.354
]
Organism
rno
Rattus norvegicus (rat)
Pathway
rno00310
Lysine degradation
rno01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
100359816 (Setd1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rno03036
]
100359816 (Setd1b)
Enzymes [BR:
rno01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
100359816 (Setd1b)
Chromosome and associated proteins [BR:
rno03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
100359816 (Setd1b)
HMT complexes
COMPASS/SET1 complex
100359816 (Setd1b)
COMPASS/SET1 complex (yeast)
100359816 (Setd1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SET
N-SET
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
100359816
NCBI-ProteinID:
XP_038946057
RGD:
2323325
Ensembl:
ENSRNOG00000001337
UniProt:
A0A8I6ANV4
LinkDB
All DBs
Position
12:complement(39056809..39082399)
Genome browser
AA seq
1992 aa
AA seq
DB search
MENSHPHHHHQQPPPQPGPSGERRNHHWRSYKLMIDPALKKGHHKLYRYDGQHFSLAMSS
NRPVEIVEDPRVVGIWTKNKELELSVPKFKIDEFYVGPVPPKQVTFAKLNDNIRENFLRD
MCKKYGEVEEVEILYNPKTKKHLGIAKVVFATVRGAKEAVQHLHSTSVMGNIIHVELDTK
GETRMRFYELLVTGRYTPQTLPVGELDAISPIVSETLQLSDALKRLKDGNLSAGCGSGSS
SVTPNSGGTPFSQDTAYSSCRLDTPNSYGQGTPITPRLGTPFSQDSSYSSRQPTPSYLFS
QDPAATFKARRHESKFTDAYNRRHEHHYVHNSAVAAAVAGATAPFRGSSDLSFGTVGGSG
GGTPFKTQSQDSTTYAHTPPPAQTATASGFKSAFSPYQTPAPPFPPPPEEPTATAAFGTR
DSGEFRRAPAPPPLPPSEPPAKEKPGTPPGPPPPDNNSMELGGRPTFGWSPEPCDSPGTP
TLESSPAGPEKPHDSLDSRIEMLLKEQRTKLPFLREQDSDTEIQMEGSPISSSSSQLSPL
THFGTNSQPGFRGPSPPSSRPSSTGLEDISPTPLPDSDEDDDLGLGLGPRPPPEPGPPDP
MGLLGQTAEVNLDLAGDRTPTSERMDEGQQSSGEDMEISDDEMPSAPITSADCPKPMVVT
PGAGAVAAPNVLAPNLPLPPPPGFPPLPPPPPPPPPQPGFPMPPPLPPPPPPPPPPAHPA
VTVPPPPLPAPPGVPPPPILPPLPPFPPGLFPVMQVDMSHVLGGQWGGMPMSFQMQTQML
SRLMTGQGTCPYPPFMAAAAAAASAGLQFVNLPPYRSPFSLSNSGPGRGQHWPPLPKFDP
SVPPPGYIPRQEDPHKATVDGVLLVVLKELKAIMKRDLNRKMVEVVAFRAFDEWWDKKER
MAKASLTPVKSGEHKDEDRPKPKDRIASCLLESWGKGEGLGYEGLGLGIGLRGAIRLPSF
KVKRKEPPDTASSGDQKRLRPSTSVDEEDEESERERDRDMADAPCELAKRDPKSVGVRRR
PGRPLELDSGGEEDEKESLSVSSSSSASSSSGSSTTSPSSSASDKEEEERESTEEEEEEE
EAEEEEEDEERPRSHISSPSSSSSSDKDDDDDDDSDDQIDSDIDDQGTALSVASEKDNVD
SEEEEIERVTTSKAPAVSSSSSSSSSSSESSGSSEFDSSSESSSSSSSSEDEDEMTVPGE
DEEEEEEEEEKETAMATATVVAMAEESMPPVGGQDFEQDRAEVPLGPRGPLRESLCTEEE
VDIEAEDEVPEMQAPVPEESPLPMGAQELSPEPPEEPSPNTQGDMLLSPELPARETEAQP
PSLPEHGPESDLEVEPEPPPMLSLPLQPPLLPPRHPRPPSPPPEPETPEPPKPPVPLEPP
PEDQPPRTPGLCGSLAKSQSTETVPATPGGEPPLSGGSSGLSLSSPQVPGSPFSYPSPSP
GLSSGGLPRTPGRDFTFTPTFPEPSGPLLLPVCPLPTGRRDERAGPLASPVLLETGLPLP
LPLPLPLPLALPVPVLRAQPRPPPQLPPLLPATLAPCPTPIKRKPGRPRRSPPSMLSLDG
PLVRPPPGPALGRDLLLLPGQPQAPIFPSAHDPRAVTLDFRNTGIPAPPPPLPPQPPPPP
PPPPVEPTKLPFKELDNQWPSEAIPPGPRRDEVTEEYMDLAKVRGPWRRPPKKRHEDLVA
QSASPEPSPPQPLFRPRSEFEEMTILYDIWNGGIDEEDIRFLCVTYERLLQQDNGMDWLN
DTLWVYHPSTSLSSAKKKKREDGIREHVTGCARSEGFYTIDKKDKLRYLNSSRASTDEPP
MDTQQGMSIPAQPHASTRAGSERRSEQRRLLSSFTGSCDSDLLKFNQLKFRKKKLKFCKS
HIHDWGLFAMEPIAADEMVIEYVGQNIRQVIADMREKRYEDEGIGSSYMFRVDHDTIIDA
TKCGNFARFINHSCNPNCYAKVITVESQKKIVIYSKQHINVNEEITYDYKFPIEDVKIPC
LCGSENCRGTLN
NT seq
5979 nt
NT seq
+upstream
nt +downstream
nt
atggagaacagtcacccccaccaccaccaccagcagcccccgccgcagcccggcccttcg
ggcgagaggaggaaccaccattggagaagttacaagttgatgattgacccggctctgaaa
aaggggcaccataaactgtaccgctacgatgggcagcatttcagcctggcgatgtccagc
aaccgcccggtggaaatcgtggaagatccccgggtggtcggcatctggaccaaaaacaag
gagctggagctgtcggtgcccaaattcaagatcgatgagttctacgtgggccctgtgcct
cccaagcaggtgacatttgccaagctgaatgacaacatccgcgaaaacttcctaagggac
atgtgcaaaaagtatggggaagttgaggaggtggagattttgtataacccgaagaccaag
aaacacctgggcatcgccaaggtagtctttgccacggtcaggggcgccaaggaggcagtc
caacacttgcatagcacttctgtcatgggtaacatcatccacgtggagctggacaccaaa
ggggaaactcgcatgcgcttctatgaactgctggtcaccggccggtacacccctcagacc
ctcccagtgggtgagctggatgctatttctccaattgtgagcgagaccctgcagctctcg
gacgctctgaagcggctcaaagatggtaacctgtccgcaggctgtggctctggctcctcc
tcggtcacccccaatagtggcgggacccccttctcccaggatacagcctactccagctgc
cgtctggacacacccaactcctacggacaaggcaccccgatcacgccccgcctgggcacc
cctttctcccaagattccagctattccagtcgtcagcccacaccctcctacctcttcagc
caggaccccgcagcaactttcaaggccaggcggcacgagagcaagttcacagatgcctat
aaccgccgtcatgaacaccattatgtccacaattccgcggtggcagctgcggtggcagga
gccacggctcctttccgaggctcctcagacctctcttttgggacagttggcggcagtggc
ggcggcactcccttcaagactcaatcccaggattccaccacatatgcccatactccacct
cctgcccaaacagccactgcttccggattcaaatcagccttttctccataccagactcca
gcacccccattcccgccaccccccgaggagcccactgccacagcagccttcgggacccgc
gacagtggggagttccggagggcacccgcgcccccacccctgccgccctctgagcctcca
gccaaggagaagccgggcacacctcccggtcccccaccccctgacaacaacagcatggag
ctgggtggtaggcctacctttggctggagtcctgagccctgtgacagccctggcactcct
actctggagtcttctccagcgggaccagagaagccccatgacagcctggactcccgcatt
gagatgctgttgaaggaacaacgcaccaagctgcccttcctgcgggagcaggactcagac
accgagatccagatggaaggcagccccatctcctcctcctcctcccagctctccccactc
acccactttggcactaactcccagcctggcttccgtggcccctcgccaccctcctcacgc
ccctctagcacgggcctagaggacatcagccctacaccactgcctgattccgacgaggat
gatgacctgggcctgggcctcgggcctcggcccccacctgagccaggccccccagaccct
atgggtcttctaggccagacagctgaggtgaatttggacctggcaggagacaggaccccg
acctcagagcggatggatgagggccagcagtcctctggagaggacatggaaatctcagac
gatgagatgccctcagcccccatcaccagcgctgactgccccaagcccatggtggtgacc
ccaggggcaggggctgtggcagcccctaatgtgcttgctccaaacctgcccctgccccca
ccccctggcttccctccgttacccccaccacctcccccacccccaccgcaacctggcttc
cccatgcccccacctttgccgccgccaccaccaccaccaccaccaccagcccatcctgca
gtgacagtccccccgccacccttgccagcgcccccgggtgtcccacccccacccatcctt
ccaccactgccgcccttcccgccaggactgtttcctgtgatgcaggtggacatgagccat
gtgctgggtgggcagtggggcggcatgcccatgtccttccagatgcaaacacagatgtta
agccggctcatgacaggccagggtacttgcccctacccacccttcatggccgctgccgcc
gctgccgcttctgctgggctacagtttgtcaacttgcccccctaccggagcccgttctcc
ctgagcaacagtggcccaggacgtggacagcactggccgcccctgcccaagtttgacccc
tctgtgccaccaccaggctacataccgcgtcaggaggatccgcacaaggccacagtggat
ggggtcctgctagtagtgctcaaggaactgaaggccattatgaagcgggatctcaaccgc
aagatggtggaggtggtggccttccgggcctttgacgaatggtgggacaaaaaggagcgg
atggccaaggcctcactgacccccgtgaagtctggtgagcacaaggatgaggacaggcca
aagcccaaagaccgaatcgcctcctgcctgctggaatcatggggcaagggcgagggcctg
ggttacgagggcctaggcctgggcattggactacggggcgccattcgcctgccctccttc
aaggtcaagaggaaggagccaccggacacagcctcttctggcgaccagaagcggctgcgg
ccttcaacctctgtggatgaggaagatgaagagtcggaacgggagcgtgaccgggacatg
gctgatgccccgtgcgaactcgccaagcgggaccccaaaagtgtgggtgtgcgacgccgg
ccaggacggcccctggagctggacagcggtggggaggaggacgagaaggagtccttgtcc
gtgtcctcatcttcctcagcatcctcatcctctggatcttccacaacctcaccctcatcc
tccgcctcggacaaggaagaggaggaacgagaaagcactgaggaggaggaagaggaagag
gaagcagaggaagaggaggaggatgaagagcgccccaggagccacatatcctccccctca
tcctcatccagctctgataaggatgatgatgatgatgatgacagtgatgaccagattgat
tctgacatcgacgatcagggtacagccctgtcggtggccagtgagaaggacaatgttgat
tctgaggaagaggagatagagagagtcaccacctccaaggccccggctgtgtcatcgtcg
tcatcgtcgtcgtcgtcctccagtgaaagttctggatcttctgaattcgattccagttct
gagtcctcatcctcatcttcatcctcggaggatgaagacgagatgactgtacctggggaa
gacgaggaagaggaggaggaggaggaggagaaagagaccgcaatggctacagcgacggta
gtggcgatggccgaggagagcatgcctccagtgggcggccaggactttgagcaggatagg
gcagaagtgcctctgggcccaagaggccccctgagggagtccttgtgcacagaagaggaa
gtggacattgaggccgaggacgaagtccccgagatgcaggctcctgtgccggaagagtct
ccattgcccatgggtgctcaggaactgagccccgagcccccagaagagccaagcccaaac
acacaaggggacatgttgctctctccagaactccctgccagggagacagaagctcaaccc
ccatcactccctgaacatggtccagagtcagacctggaagtggagcccgagccccctccg
atgctctccttacccttgcagccaccattgctaccccctcgacatccccggccacccagc
ccaccacctgagcccgagaccccagagccccccaaacctcctgtccccctggagcctcct
cccgaagaccagcctccacgtaccccgggcctctgtggcagtctggccaagtcacagagc
acggagacagtgccggccaccccgggcggggagcctccactgtcagggggcagcagtggc
ctgtcactgagctccccgcaggtgcctggcagcccgttctcatacccttccccgtcccct
ggcttgagcagtgggggccttccacggacacctggtcgggacttcaccttcacacctacc
ttccctgagcccagtgggcccttgcttctgcctgtctgccccctccccactggtcgacga
gatgagcgcgctggccccctggcctccccagtgctcctggaaactggcctgcccctcccc
cttcccctgcctctgcccttacctctggcattgcctgtccctgtcctgagggcccagcct
cggccgcctccccagctgcctcccttactgcctgctaccctagctccctgcccaaccccc
atcaagaggaagccaggccggccccggcgatccccaccatctatgctgtccttggatgga
cctttggtccggccaccaccagggcctgcccttgggagggaccttctgctcctgccaggc
caaccacaggcccccattttccccagtgcacatgatccccgggccgtgaccttggacttc
cggaacacggggatcccagcccccccaccgcccctcccaccccagcctcctccacccccg
ccaccaccacctgttgagcccaccaagctgcccttcaaggagctggacaaccagtggccc
tctgaagctattcccccaggacctcgccgagatgaggtcactgaagagtacatggacctg
gccaaggtgcggggaccatggcgacggccacctaagaagcgccacgaagacctggtggcc
caatcagcctcacccgaaccctcaccaccccagcctctcttccggccccgctcagagttt
gaggagatgaccatcctgtatgacatctggaatggtggcattgatgaggaggacatccgc
ttcctatgcgtcacctacgagcgcctgttgcagcaggacaatggcatggactggctgaat
gacacactctgggtctaccatccctccaccagcctttcctcagccaagaaaaagaaacgg
gaggacggtatccgtgagcacgtgacaggctgcgcccgaagcgagggcttctacaccatc
gacaagaaagacaagctgagatacctcaatagcagccgtgccagcacagatgagcccccc
atggatacccagcagggtatgagcatcccagcacagccccatgcctctacccgggcaggc
tcagagcggcggtctgagcagcggcgcctcctgtcctccttcaccggcagctgtgacagt
gacctgctcaagttcaaccagctcaagtttcggaagaaaaagctcaagttctgtaagagc
cacattcacgactggggcctgtttgccatggagcccatcgctgccgatgagatggtcatt
gagtacgtgggtcagaacatccgccaggtgattgcagacatgagggagaaacggtacgag
gacgaaggcatcggtagcagctacatgttcagggtagaccacgacaccatcatcgacgcc
accaagtgcggcaactttgcgcggttcattaatcacagctgcaatcccaactgctatgcc
aaggtgatcacggtggagtcccagaagaaaattgtcatctactccaagcagcacatcaat
gtcaacgaggagatcacatatgactataagttccccattgaggacgtcaagataccctgc
ctctgtggctccgagaactgccgggggaccctcaactag
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integrated database retrieval system
