Rattus norvegicus (rat): 100360302
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Entry
100360302 CDS
T01003
Symbol
Sec16a
Name
(RefSeq) protein transport protein Sec16A
KO
K20353
COPII coat assembly protein SEC16
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rno04131
]
100360302 (Sec16a)
Membrane trafficking [BR:
rno04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
100360302 (Sec16a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec16_C
Sec16
Motif
Other DBs
NCBI-GeneID:
100360302
NCBI-ProteinID:
NP_001263346
RGD:
2322350
Ensembl:
ENSRNOG00000019122
UniProt:
D3ZN76
LinkDB
All DBs
Position
3:complement(29627779..29662925)
Genome browser
AA seq
2346 aa
AA seq
DB search
MQPPPQAVPSGVAGPPPAGNPRSSFWANSPYRKPANNNAPVAPITRPLQPVTDPFAFNRQ
TLQNTPVGSSSKSSPPNLPGPALPVFSQWPGLPVPPTNAGDSSTGLHEPLPGTLSQPRAD
PSLFPPASTPSSLPGLEVNRSAEVDSSSGPEVQMLPHPPHYIPGVGPEQPHGGHLNDSGA
GPDQSMNRHAPHDGAVAHAASPFFPQPQMPGQWGPVHGGPPPSYHHHSPCLEGPVQDMGP
QAASLPHFPSPSSLHEGPGHESRVPQTFTPASLASGEGNEIVHQQSKNYPSSSFPPKHSF
EQNSRVGNMWASAEFRQNPGVNKEHLLDPAHVNPFTQGNSPENQVHHPPVAATNHALQEA
ASGALSMFFQGEETENEENLSSEKAGLDDRLDSGSFSSTSRLGHPPLPGAGGVYQAAQEG
DVQPYFSQFVGIRHDKQTTMTPANDAWGDIPGAGTHCASGPQCENVENLEFVQNQEVLPR
ETVNVDPFSPSDQFRYGPLPGPAASRPVTSGLTRGGGLNLEAPDMPLHPTRPDSVSSSYS
NHSHRSPPGSARPQELVGTFIQQEVGKLEDDTSGSFFKQIDSSPVGGETDEMTRSQNYCS
SLSQPSTPSPPKPTGVFQTSANSSFEPVKSHLVGVKPVEADRANMVVEVRGTQNCQKHGA
AVLPPDATPGNLEQPPDNMETLCAPQACPLPLSTTGEAGQLVSHTAGPPLDTVRPMPDKR
SSARAQGPVKCESPATTLWAQNELPDFGGNVLLAPAAPALYVPVKPKPSEVVHHPEKGMS
GQQSWKSGSVPPLQNQDPPGASENLENPPKVGEEEALPLQASSGYASLLSSPPTESLHNQ
PVLIAQPDQSYNLAQPINFSVSLPNPNEKNQCWGDAVVGEKSMVSTRALGADHEEHAALS
AIPASTVTGSSLPNSVTQNCAPRGSGSSEMIASQPASWLVQQLSPQIPQSQHPNAEKGPS
EFVNSPANGSVMLAPPANSAVIPNSNKGYHSRNPEEAIGALDFTLSRTLENPVRMCSPSH
SNSPASQQPLANHPRQSGPGLHNQDHFYQQVTKDAQDHRSLERGQSELVPPPPQNSPQQV
PQAACPEPSNPESPPTQGQSEGLVQPSASPAPVNTGQQPQPPQSSSASVTSTNSNQAAVR
SEQPWLHPPPTTFGPAPQDLASYYYYRPPYEAYQSPYPSPYPSDPGAASLYYQDIYGLYE
PRYRPYDSSASAYAENHRYSEPERPSSRASHYSDQLTPRQGYPEGYYNSKSGWSSHSDYY
ANYYSGQYDYGDPGRWDRYYGSRFRDPRTWDRRYWYDSDHDPYRKDNYAYSDRPEKCDDH
WRYDPRFTGSFDDDTELHRDPYGEEVDRRSIHSEHSARSLRSTHSLPSRRSSLSSHSHQS
QIYRSHHVTGGSFEAPHAPGSFHGDYAYGTYASNFSGAHGFPEYSYPADTSWPAAEQVPS
RPTSPEKFTVPHVCARFGPGGQLLKVIPNLPSEGQPALVEIHSLETLLQHTPEQEEMRSF
PGPLGKDDTHKVDVINFAQNKATKCLQNESLIDKESASLLWNFIILLCRQNGTVVGTDIA
ELLLRDHRTVWLPGKSPNEANLIDFTNEAVEQVEEEESGEAQLSFLTDSQTVTSSVLEKE
TERFRELLLYGRKKDALESAMKNGLWGHALLLASKMDSRTHARVMTRFANSLPINDPLQT
VYQLMSGRMPAASTCCGDEKWGDWRPHLAMVLSNLNNNMDVESRTMATMGDTLASKGLLD
AAHFCYLMAQVGFGVYTKKTTKLVLIGSNHSLPFLKFATNEAIQRTEAYEYAQSLGAHTC
SLPNFQVFKFIYLCRLAEMGLATQAFHYCEVIAKSVLTQPTAYSPVLISQLIQMASQLRL
FDPQLKEKPEEESFVEPAWLVQLQHVERQIQEGTVLWNQDGTEPQQCHITSGSEVEQPDG
PGLNQQAGPRADNPLLMPSTEPLVHSVQLLPTAPQTLPDGQPAHLARVPMFPVPMSRPPL
ELSAAYGPPGSVLGFPESSRSDPAVLHPGQALPPATPGLQESGPPLQEARSPDPEMVPQG
SPVRHSPPEPREEEFGKNVADLGSSRTAQDSETSPVWDLGSSSLTRAPSLTPDSEGKKPA
QAVKKEPKEPKKTESWFSRWLPGKKRTEAYLPDDKNKSIVWDEKKNQWVNLNEPEEEKKA
PPPPPTSFPRVPQAAPTGPAGPPMASVNVFSRKAGGSRARYVDVLNPSGTQRSEPALAPA
DFFAPLAPLPIPSNLFVPNPDAEESQPADGTGCRGQAPAGTQSKAEPTLEAKVVSSTVSA
PGPELSPSKPADGSQGGEAPGDHCPAGATPGGSVPFYNPAQLVQASVTSGTSRPGRIGQR
KYAALN
NT seq
7041 nt
NT seq
+upstream
nt +downstream
nt
atgcagccaccacctcaggcagtcccgtctggtgtggctggcccacccccagctgggaat
cctcgaagctcgttctgggccaacagcccttacaggaagccagccaataataatgcacca
gtggctcccataacacgcccactgcagccagtaacggatccgtttgcttttaacagacag
actcttcaaaacacaccagtgggcagttcatccaaaagcagcccacctaatttgcctggc
ccagccctccctgttttttctcagtggcctggtttgcctgtgcctcccacaaatgctggg
gatagctccacaggacttcatgagcctctgccaggaactctgtcacagcctagagcagac
cccagtctatttcctcctgcatctaccccttcttcattgcctgggctggaggtgaacagg
agtgctgaggttgattccagctcaggacctgaagtccagatgctgccacatccacctcac
tacattccaggagtgggtcctgagcagcctcacggaggccatctgaatgacagtggggct
gggcctgaccaatccatgaataggcacgccccacatgatggtgctgtggcccatgcagca
tctcctttcttccctcagccccagatgccaggtcagtgggggcctgtgcatggaggccct
ccgccctcctatcatcatcactcaccctgcctggagggccctgttcaggacatggggccc
caggctgccagcttgccccatttcccctctccatctagtctacacgagggacctggccat
gagtcccgtgtcccacaaacgtttactccagcatccttggccagtggtgaaggaaatgag
atagtccaccagcaaagtaaaaattacccatcgagtagcttcccccctaaacacagtttt
gagcagaattccagagttgggaatatgtgggcaagcgcggagttcaggcagaatccagga
gttaataaagagcatctgctagaccctgcccatgtgaatcccttcactcagggaaacagc
cctgagaaccaggtgcaccatcccccagtggccgcaactaaccatgccctgcaagaagca
gcctccggagcgctctcaatgttttttcaaggggaggagacagagaacgaggaaaatctc
tcatctgaaaaagcaggccttgatgacagattagactcgggtagcttctcttctacctcc
agactgggccatccaccactccctggagctggtggtgtctaccaggccgctcaggaagga
gatgtgcaaccttatttttctcagtttgtgggcatccgtcatgacaaacagaccactatg
actcctgctaatgatgcgtggggtgatattccgggtgctgggacccactgtgctagtggg
ccacagtgtgagaatgtagagaacctagaatttgttcagaatcaagaagttttgccacgt
gagaccgtgaatgtggatcccttttccccgagtgatcagtttcgatatgggccccttcct
gggccagctgcctccaggcctgttacttcgggcctcactagaggaggagggctaaatctt
gaggcccctgacatgccactgcaccctacacgacctgacagtgtgtcatccagctacagc
aaccatagtcacagaagtcctcctgggtcagccagaccccaagaattggtgggcacattc
attcagcaagaagttggaaaactcgaagatgatacgtcagggagtttttttaagcaaatt
gattcttctccggttggaggtgaaacagatgagatgaccaggagtcaaaattactgcagc
agcctgtcccagccttcaactccaagccctccaaaacctacgggagtcttccagacaagt
gcaaatagttcttttgagccagtaaaatcccacttggttggagtgaaaccagttgaagca
gatcgtgccaacatggtggttgaagtgagagggacccagaactgccagaagcacggggcc
gctgttctaccacctgatgccaccccaggaaacctggaacagccaccagacaacatggag
accctgtgtgcacctcaggcctgccctttgcctcttagcaccactggagaggctgggcaa
ctggtttcacacacagcagggccacccttggatactgtgcgccccatgcctgacaagagg
tcctcagccagggcccaggggcctgtgaaatgtgagagcccagccacaactctgtgggca
caaaacgaactgccagattttgggggcaatgtccttctagcccctgctgcccctgcactt
tatgttcctgtaaaaccaaaaccttcagaggttgttcatcatccagaaaagggcatgtct
ggacagcagtcatggaaatcagggtctgtgccccctttgcagaaccaagaccctcctggt
gcttctgagaaccttgagaaccctcccaaggtaggagaagaggaggcccttccattgcag
gcaagttctggttatgcgagtttgctgtcctcaccacccactgaatctttacacaatcaa
cctgtcctgattgcccagcctgatcaaagctataatttggctcagcccattaatttttct
gtgtccttaccgaatcctaatgagaagaatcagtgctggggagatgctgtggtgggggag
aaatccatggtgagcacccgggctcttggtgctgaccatgaagaacatgctgccttgtct
gcaattccagccagtactgtcactggctcgtctttgcctaacagtgtcacccagaactgt
gcccctcgaggttctgggtcttctgaaatgattgctagccagcctgccagttggttggtt
caacagctgtcccctcagattcctcaaagtcagcaccccaatgcagagaagggtccttct
gagtttgttaatagccctgctaatggaagtgtgatgctagctccacctgcaaacagtgct
gtgatacctaacagtaataaggggtatcactctagaaacccggaagaagccatcggtgcc
ctagacttcacattgagtagaactttggaaaatcctgtgagaatgtgtagcccatctcat
tcaaacagcccagcttctcagcagcctcttgccaatcatcccagacaatctgggcctggg
ctgcataaccaggatcatttctaccagcaggtaacaaaagatgctcaggatcaccgtagc
ctagaaagaggccagtcagagctggtgcctcctccgccacagaattctccccaacaagta
ccccaagctgcgtgtccagagccttcaaatccagaaagcccacccacacaaggacagtct
gaaggcttggtccagccatcagcaagtccagctccagtcaacacaggccagcagcctcag
ccaccgcagtcctccagtgcatcggttacatctaccaactccaaccaggcagctgtgcgg
tcagaacagccatggctacacccacctcccactacttttggcccagcacctcaagacttg
gcatcctactactattatagacccccgtatgaagcctaccagtctccgtacccttcaccg
tacccatcagatcctggagcagcctctttatactaccaagatatctatggcctgtatgag
cctcgttacagaccctatgacagctcggcatctgcttatgccgagaaccaccgctactct
gaacctgagcggcccagctcccgtgcaagtcactattctgaccagctcactcccaggcaa
ggatatcctgaaggatactacaattctaagagtggatggagcagtcacagtgactactac
gcaaattactactctggccagtatgattatggagacccaggccgctgggaccgttactat
gggtctcgatttagggaccctcgcacctgggaccggaggtactggtatgactctgaccat
gacccatacaggaaggacaactatgcttacagtgacaggcctgagaaatgtgatgatcac
tggaggtatgaccctcgcttcactgggagcttcgatgatgacactgagctccacagggac
ccctatggagaagaagtagacagacgcagcatccacagcgagcactcagcccggagcctg
cgcagtactcacagcctgcccagccgccgcagcagcctcagctcccattcacaccagagt
cagatttacagaagccaccatgtgactggcggttcctttgaggccccccatgccccaggc
tcatttcatggtgattatgcctatggtacctatgccagcaatttcagcggtgcccatggt
tttccagagtacagctaccctgcagacacctcctggcctgctgcggagcaagttccatca
agaccgacctctcctgagaagtttacagtgcctcacgtctgtgccaggtttggtcctggt
ggtcagctcctcaaagtgatacccaacctgccttcagaaggacagcccgcattggtggag
atccacagcttagagaccttgctgcagcacacacctgagcaggaagaaatgcgctccttc
ccaggacctctcggcaaagatgacactcacaaagtagatgttattaactttgcacaaaac
aaagcgacaaaatgtttgcagaatgaaagtttaattgacaaagagtctgcaagtcttctt
tggaacttcattattctgttatgcagacagaatgggaccgtcgtgggaacagacatcgca
gagctcttgttacgggaccatagaactgtgtggcttcctgggaagtcacccaacgaggca
aacctgatagattttaccaatgaggctgtggagcaagtggaagaggaggagtcaggggag
gcccagctctcatttctcacagacagtcagacagtgaccagcagtgtgctggagaaggag
actgagcggttccgtgaactcttgctgtacggtcggaagaaggatgctctggagtctgcc
atgaaaaatggcttatggggtcacgccctgctgcttgcaagtaagatggacagccggaca
catgcccgtgtcatgaccaggtttgccaacagtcttccgatcaatgaccccctgcagact
gtctaccagctcatgtctggacggatgcctgctgcatccacgtgttgtggagatgagaaa
tggggagattggaggccacatcttgcaatggttttgtccaacctgaacaacaacatggat
gtggaatctcggaccatggctaccatgggtgataccctagcatcaaaaggcctgctggat
gccgcacatttttgctacctcatggcccaggttggatttggggtttatacaaagaaaact
accaaacttgttttgataggctcaaatcacagtttgccatttttaaagtttgccactaat
gaagccattcaaaggacggaggcttatgagtacgctcagtcccttggggcgcatacctgt
tccttacctaacttccaggtgtttaaattcatctacttgtgccgcctggctgaaatggga
ctcgctacacaggccttccactactgtgaagtaatagccaagagtgtcctgacacagcct
actgcatactccccagtgctgattagccagttgattcagatggcttcccagttacgcctc
ttcgatcctcaactgaaggagaagccagaggaggagtcctttgtggagcctgcctggttg
gtgcagctgcagcacgtggagaggcagatccaggagggcactgtgctgtggaaccaggat
ggaactgaaccccagcagtgtcacatcacatcgggctctgaggtggagcagccagatggc
cctggactcaaccagcaggcagggccaagggccgacaaccctctcctgatgccaagcact
gagcctttggtgcacagcgtgcagctgctgcccacagctcctcagacattgcctgatggc
cagcctgctcaccttgccagggtgcccatgttcccagtaccaatgtctcgtccccccctg
gagctgagtgctgcctatggacccccggggtctgtacttggcttcccagaatcctccaga
tctgatcctgcagtgctgcatcctgggcaggccctaccacccgctacaccaggtctccag
gaaagtgggccaccactccaggaggccagaagcccagatccagaaatggtgccacagggc
tcacctgtcagacactcccctcctgagccccgtgaagaggagtttggcaagaacgtcgct
gacctgggctcctctagaacagcacaggactcggaaacctccccagtgtgggatcttggc
agctccagtctgacacgtgccccatctttgacacctgattctgaagggaagaaacctgca
caagctgtcaaaaaggagcccaaggagcccaagaagaccgagtcctggttctctcgctgg
ctgcctgggaagaaaaggacagaagcttatctaccagatgacaagaacaaatcaattgtt
tgggatgaaaagaaaaaccagtgggtgaatctgaatgaaccggaggaggagaagaaggct
ccacccccacctccaacatcgttccccagggttccccaggcggctcccactgggcctgca
ggaccacccatggcctccgtgaatgtgttttctagaaaagcaggtgggtccagagctcgc
tatgtggatgttctcaacccaagtggaacacagcggagtgaaccagctcttgctcctgcg
gatttctttgctcctcttgccccgctgccaatcccttctaacttatttgtaccaaaccca
gatgcagaagagtcacaacctgcagatgggactggctgtaggggacaggcaccagctggg
actcaatctaaggcagagcccaccctggaagccaaggtggtaagctctacagtatcagcc
cctgggcctgaactctcaccctccaaaccagcagatggctcccagggaggagaggctcct
ggagaccactgtcctgcaggggccactcctggtgggtctgtgcccttttacaaccctgcg
cagttggtgcaggcgtctgtcacctcggggacttcaaggccaggaaggattggccaaaga
aaatatgcggcactgaactag
DBGET
integrated database retrieval system