Rattus norvegicus (rat): 100360757 Help Entry 100360757         CDS       T01003                                  Symbol Ctcfl1 Name (RefSeq) transcriptional repressor CTCFL   KO K23195   transcriptional repressor CTCF Organism rno  Rattus norvegicus (rat) Brite KEGG Orthology (KO) [BR:rno00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:rno03000]     100360757 (Ctcfl1)    03036 Chromosome and associated proteins [BR:rno03036]     100360757 (Ctcfl1) Transcription factors [BR:rno03000]  Eukaryotic type   Zinc finger    Cys2His2 others     100360757 (Ctcfl1) Chromosome and associated proteins [BR:rno03036]  Eukaryotic type   Chromatin remodeling factors    Other chromatin remodeling factors     100360757 (Ctcfl1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  zf-H2C2_2 zf-C2H2 zf-C2H2_4 zf-H2C2_5 zf-C2H2_16 zf-C2H2_REST zf-C2H2_15 zf-C2H2_jaz Zf-C2H2_ZNF451_C zf-C2H2_ZN142 zf-C2H2_7th_ZNF462 zf-C2H2_7 zf-C2HE C2CH-3rd_BIRD-IDD Motif Other DBs NCBI-GeneID:  100360757 NCBI-ProteinID:  NP_001309415 RGD:  2321501 Ensembl:  ENSRNOG00000028661 UniProt:  D3ZQ48 LinkDB All DBs Position 3:complement(182286637..182309272) Genome browser AA seq 645 aa AA seqDB search MAAAEVPVASGHFTQIKEQKLKPGDLEEEKEEGGVQRGEAQEGAVEEAEAEPQELPSRAP VESDRRILTLQTLHLTSQDVHLQGLGWLSVPHSEELSMTVPQAESILQLPSVLWLDPEPP LSLQHCVTVSIPEELYPPEMLELRHFHLLRENVPEDDEENQESTSNLEESTAPKKPEEDE KDQLLPQGGTDKKEERFLFVEMKPREGKDEIVLTISHLSLEEQQDPPAAKHTSAPGAKAA KPKPQRQTKGRPRTFQCDTCPFTSSKLSTFNRHIKIHSDERPHLCHLCLKSFRTVTLLRN HVNTHTGTRPYKCGDCDMAFVTSGELVRHRRYKHTHEKPFKCSLCKYASVEASKLKRHIR SHTGERPFQCSQCAYASKDTYKLKRHMRTHSGEKPYECPTCHARFTQSGTMKIHIAQKHG ENVPKHECPHCATIIARKSDLRVHLRNLHGHSPEEIKCRYCPAAFHERYALLQHQRTHKN EKKFKCKQCDYACKQERCLTAHMRTHTGERPFSCLTCNKHFRQKQLLTVHLRKYHDPSFV PSVHLCLKCGKGFSRWSNLQRHRKKCDPEHEKSAPSRNGRPVTRAQASEEGAEHDKDVAT QESATSGEPRPPEEQALGHQGESAAGSPSPDQGLTCEMIFNMMDK NT seq 1938 nt NT seq  +upstreamnt  +downstreamnt atggctgctgctgaggtccctgttgcttctgggcacttcacccagatcaaagagcagaag ttgaagcctggagacctggaagaggaaaaagaggagggtggggtacaaagaggggaagcc caggagggagctgtcgaggaggccgaagccgagccccaggaactgccttcgagggcccca gtggagagcgataggcggatcctgaccctgcaaaccctgcacctgacgtcccaagatgtg cacctacaggggctgggatggctgagcgtgccacactcggaggagctttcaatgacggta cctcaggccgaaagcatactgcagctgccgtctgtgctgtggctggacccagagcccccg ctcagccttcagcactgcgtgaccgtcagcatccccgaagagctgtacccaccagagatg ctggagctgagacattttcacctgctgcgcgagaacgtgccggaggatgacgaggagaac caagagtcaacgtcgaacttggaggaaagcacagccccgaagaagccagaagaagatgaa aaggaccagctcttgccccagggagggacagataagaaagaagagagattcctctttgtg gaaatgaaaccaagagaagggaaagacgaaatcgttctgaccatttcccacctcagcctg gaggaacaacaagatccaccagctgcaaagcacaccagtgcgccgggagccaaggccgca aaaccaaaacctcaaaggcagaccaagggaagaccccggactttccagtgcgacacctgc ccgttcacttcttccaaactctcaactttcaaccgtcacatcaaaattcacagcgacgag aggccgcacctgtgccacctgtgcctgaagtctttccggaccgtcactctcctccggaac catgtcaacacccatacagggaccaggccctacaagtgcggggactgtgacatggcgttt gtcaccagcggagagctcgtcaggcacagacgttacaaacacacgcacgagaaacccttc aagtgctccctgtgcaagtacgccagcgtcgaggcaagcaagctgaagcgtcatatccgc tcacacacgggcgagcgtcccttccagtgcagccagtgtgcttatgccagcaaggacacc tacaaactgaaacgccacatgcggacacactcaggtgagaagccgtacgaatgccccacc tgccatgcccggttcacccagagtgggaccatgaaaatccacatagcgcagaagcatggc gagaatgtgcccaaacacgagtgtccccactgtgccaccatcattgcgaggaagagtgac ctgcgtgtccatctgcgcaacctgcacggccacagcccggaggagatcaagtgcagatac tgccctgccgccttccacgaacgctatgccctccttcagcaccagaggacccacaagaat gagaagaagttcaagtgcaaacagtgcgattacgcgtgcaagcaggagcgatgcttgacc gcgcacatgcgcacgcacacgggagagaggcctttctcctgcctgacctgcaacaaacat ttccggcagaagcaactgctcaccgtgcacctgaggaagtaccatgacccgagcttcgtc cccagtgtccacctgtgcctcaagtgtggtaaaggtttttcccgctggagcaacctgcag agacacagaaagaagtgtgacccagagcatgagaagtcagccccctccagaaatggaaga ccagtgacaagggctcaggcctctgaggaaggagcagaacatgacaaagatgttgccacc caggagagcgccacctctggagaacctcggccccctgaagagcaggctctgggccaccaa ggagaaagcgcagctgggagcccgagcccagatcaaggccttacctgtgagatgatcttc aacatgatggataagtga

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