Rattus norvegicus (rat): 100360846
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Entry
100360846 CDS
T01003
Symbol
Psmb6l1
Name
(RefSeq) proteasome 20S subunit beta 6 like 1
KO
K02738
20S proteasome subunit beta 1 [EC:
3.4.25.1
]
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03050
Proteasome
rno05010
Alzheimer disease
rno05012
Parkinson disease
rno05014
Amyotrophic lateral sclerosis
rno05016
Huntington disease
rno05017
Spinocerebellar ataxia
rno05020
Prion disease
rno05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
100360846 (Psmb6l1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
100360846 (Psmb6l1)
05012 Parkinson disease
100360846 (Psmb6l1)
05014 Amyotrophic lateral sclerosis
100360846 (Psmb6l1)
05016 Huntington disease
100360846 (Psmb6l1)
05017 Spinocerebellar ataxia
100360846 (Psmb6l1)
05020 Prion disease
100360846 (Psmb6l1)
05022 Pathways of neurodegeneration - multiple diseases
100360846 (Psmb6l1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rno01002
]
100360846 (Psmb6l1)
09182 Protein families: genetic information processing
03051 Proteasome [BR:
rno03051
]
100360846 (Psmb6l1)
Enzymes [BR:
rno01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.25 Threonine endopeptidases
3.4.25.1 proteasome endopeptidase complex
100360846 (Psmb6l1)
Peptidases and inhibitors [BR:
rno01002
]
Threonine peptidases
Family T1: proteasome family
100360846 (Psmb6l1)
Proteasome [BR:
rno03051
]
Eukaryotic proteasome
Core particles (20S proteasome)
beta type subunits
100360846 (Psmb6l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Proteasome
Motif
Other DBs
NCBI-GeneID:
100360846
NCBI-ProteinID:
NP_001316812
RGD:
2321312
Ensembl:
ENSRNOG00000011827
UniProt:
P28073
A0A0G2JSL0
A6IH77
Structure
PDB
PDBj
LinkDB
All DBs
Position
2:complement(95741230..95741946)
Genome browser
AA seq
238 aa
AA seq
DB search
MAAALAVRGAISAPAFGPEALTPDWENREVSTGTTIMAVQFDGGVVLGADSRTTTGSYIA
NRVTDKLTPIHDHIFCCRSGSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMC
YRYREDLMAGIIIAGWDPQEGGQVYSVPMGGMMVRQSFAIGGSGSSYIYGYVDATYREGM
TKDECLQFTANALALAMERDGSSGGVIRLAAIQQSGVERQVLLGDQIPKVTISTLPPP
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgccttagctgttcgtggagccatctctgcaccggcctttgggccggaggcg
ctcactccagactgggaaaaccgagaagtctccacagggaccacgatcatggctgtgcaa
tttgacgggggcgtggttctaggagcagactccagaacaaccactgggtcgtacatcgcc
aatcgagtgactgacaagctgacccctatccacgatcacatcttctgctgccgctcaggc
tcggcagctgatacccaagcagtagctgatgctgtcacgtaccagcttggtttccacagt
attgagctgaacgagcctccactagtgcacacagccgccagtctctttaaggagatgtgt
taccgctacagagaagatctgatggcaggaatcatcatcgcaggctgggaccctcaagaa
ggagggcaggtgtactctgttcccatgggaggtatgatggtaagacagtcctttgccatc
ggaggctccgggagctcatatatctatggctatgttgatgctacctatcgggaaggcatg
accaaggatgaatgtctgcaattcactgccaatgctcttgctttggctatggaacgggat
ggctccagtggaggagtgatccgcttggcagccattcaacagtcgggggtagagcggcag
gtgcttttgggagaccagatccccaaggtcaccatctccactttgccacctccctga
DBGET
integrated database retrieval system
