Rattus norvegicus (rat): 100362764
Help
Entry
100362764 CDS
T01003
Symbol
Ddx55
Name
(RefSeq) ATP-dependent RNA helicase DDX55
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rno03009
]
100362764 (Ddx55)
Enzymes [BR:
rno01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100362764 (Ddx55)
Ribosome biogenesis [BR:
rno03009
]
Eukaryotic type
Pre-60S particles
Helicases
100362764 (Ddx55)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
CTT_SPB4
Helicase_C_2
SBF_like
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
100362764
NCBI-ProteinID:
NP_001258255
RGD:
2324094
Ensembl:
ENSRNOG00000001043
UniProt:
A6J0Y4
D3ZX56
LinkDB
All DBs
Position
12:complement(37695444..37711198)
Genome browser
AA seq
600 aa
AA seq
DB search
MEHVTEGSWESLQVPLHPLVLGALRELGFLHMTPVQSATIPLFMRNKDVAAEAVTGSGKT
LAFVIPILEILLRREEKLKKNQVGAIVITPTRELAIQIDEVLSHFTKHFPQFSQILWIGG
RNPGEDVERFKQHGGNIIVATPGRLEDMFRRKAEGLDLASYVKSLDVLVLDEADRLLDMG
FEASINTILEFLPKQRRTGLFSATQTQEVENLVRAGLRNPVRISVKEKGVAASSTQKTPS
RLENHYMICKADEKFNQLVHFLRSRQQEKHLVFFSTCACVEYYGKALEALVQRVKILCIH
GKMKYKRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTA
RIGHGGSALVFLLPMEEAYINFLAINQKCPLQEMSLQRNTVDLLPKLRAMALADRAVFEK
GMKAFVSFVQAYAKHECSLIFRLKDLDFAGLARGFALLRMPRMPELKGKQFPDFVPVDID
TDTIPFKDKIREKQRQKLLEQKRKERTENEGRRKFIKNKAWSKQKAKKERKKKMNAKRKK
DEGSDIDDEDMEELLNDTRLLKKFKKGKITEEEFEKGLLTSTKRTVRLTESGVSDSEEDS
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggaacacgtgacggagggttcctgggagtcgctgcaggtgccgctgcatcctctggtg
ctcggagctctgcgcgagttgggcttcctgcacatgacgccggtgcagtctgccaccatc
cctctgttcatgagaaacaaagatgttgctgcagaagccgtcaccgggagtggaaaaact
ctggcttttgtcatccccattctggagatccttctgagaagggaggagaagttaaagaag
aaccaggtaggagccatcgtcatcacccccactcgggagctggccattcagattgatgag
gtcctgtcacacttcacgaagcacttcccgcagttcagccagattttgtggattggaggc
cggaaccctggagaagatgtggagaggttcaagcagcacggtgggaacatcattgtggca
accccaggccgcctggaggacatgttccggaggaaggctgagggtctggacctggccagc
tatgtgaagagcttggatgtcctggtgctggacgaggcagacagacttctcgacatgggc
tttgaggcaagcataaacacaatcctggagtttttgccaaagcagaggcgaacaggcctt
ttctcggccactcagacacaggaggtggagaacttggtgcgagcaggcctccgcaaccct
gtccgaatctctgtgaaggagaagggcgtggcagccagcagcacccagaagacaccgtct
cgtctggagaaccactatatgatatgtaaggcagatgagaaattcaaccagctggtccat
ttccttcggagccgtcagcaggaaaagcacctggtcttcttcagcacgtgcgcgtgtgtg
gaatactatggaaaggccctggaggcgctggtgcagagggtgaagatcctgtgcatccac
gggaagatgaagtacaagcgcaataagatcttcatggagttccgcaagctgcagagtggg
atcttggtgtgcactgacgtgatggcccggggaattgatattcctgaagtaaactgggtt
ttgcagtacgaccctcccagcaacgccagtgccttcgtgcatcgatgtggacgcactgcc
cgaattggccacggtggcagtgctctggtgttcctgctgcccatggaggaagcgtacatc
aacttcttggccatcaaccagaaatgccccctgcaggagatgagcctccagagaaacact
gtagaccttctacccaagctccgggccatggccttggctgacagagccgtgttcgagaag
ggcatgaaagccttcgtgtcctttgttcaggcttatgcaaagcacgagtgcagtctcatc
ttcaggttgaaggatcttgactttgctgggcttgctcgaggctttgccctgctgaggatg
cccaggatgccagaactaaaggggaagcagtttccagattttgtaccagtggacattgat
actgacacaatcccatttaaggataaaattagagaaaaacagaggcagaaacttttggag
caaaaaagaaaagagaggacagaaaatgaagggagaagaaaattcatcaaaaataaagct
tggtcaaagcagaaggccaaaaaggaaaggaagaagaagatgaatgcaaagaggaaaaag
gatgagggttctgatattgatgatgaggacatggaggaactccttaatgacacaaggctc
ttgaaaaaatttaaaaaaggtaaaatcacagaagaagaatttgagaaggggctgttgaca
agtaccaaaagaacagtccggctgacagagtcaggtgtctcggactcagaagaggacagt
tga
DBGET
integrated database retrieval system
