Rattus norvegicus (rat): 100364350
Help
Entry
100364350 CDS
T01003
Symbol
Nwd1
Name
(RefSeq) NACHT domain- and WD repeat-containing protein 1 isoform X1
KO
K24734
NACHT domain- and WD repeat-containing protein
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rno04990
]
100364350 (Nwd1)
Domain-containing proteins not elsewhere classified [BR:
rno04990
]
WD40 repeat (WDR) domain-containing proteins
Other WDR domain-containing proteins
100364350 (Nwd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
NACHT
AAA_16
CNH
AAA_22
nSTAND1
ATPase_2
Nup160
AAA
DUF4062
RuvB_N
WD40_like
RNA_helicase
Hira
IstB_IS21
nSTAND3
AAA_28
Motif
Other DBs
NCBI-GeneID:
100364350
NCBI-ProteinID:
XP_038950913
RGD:
2321209
Ensembl:
ENSRNOG00000052129
LinkDB
All DBs
Position
16:complement(17204731..17278184)
Genome browser
AA seq
1563 aa
AA seq
DB search
MDTEREALQCTAYPEVQSFCQKHGLAFEAVDLRWGIPNTQATDYLTTELCLEELERCQKT
SVGPAFVALLGDQYGPCPVPQRIEEKEWEALRAQLTSRPRDLELVTRHFQRDDNTIPPTY
VLQPPGSGVVPGPEEATLTSVLRGGAQEAWRLGLISQEQWMCYHRSVIEWEIEHGLLNSA
RGDQGATVFLRDVQDLSKHILDDCCLKMVDRLADGCLDTNAQSLLSGLKGRILDAQPGAL
KSHHLPWSRDLVNPKNKTHARYLKQLSEQFVARTNHQVLEQLRELELARQELGWLYQEIR
HHLWQSTESTKVFCGHQELLAQLKQRLRQDESRTHTPLVLFGPPGIGKTSLMCKLAQQVP
ELLGHKTVAVLRLLGTSKLSLDARSLLRSLSFQLCLAYGLPLPPAQVLEAHSRVGHFFHI
LLHTVSQRNFESLVLLLDSVDDLDSIRHTPRVSWLPLKCPPRVHLILSACSGQQVLCNLQ
QTLKDPSAYWEVKALSGSQGQEFIQLLLAAERRMLSPGQRDVLWASLPECGHPGRLRLAF
EEARKWASFTVPVPLATTAEEATHQFCIRLEETHGQLLVARVLGYIVSSRYGLSEAELKD
VLSLDDEVLQAVYRDWTPPSKELLRFPPLLWVRLRRDLGHCLVRRPVDGCILLAIAHRQL
SQVIQVRYLSGPERAKRHGVLAEFFSGAWSQGIKKLITLPLVGKPLNLDRKVAPQPLWFS
GTVANWRKLTELPFHLLHAGCLEELKQEVLGNMSWISCRGISGGIEDLLDDFDMCAPHMD
SPEVYLVREAIQLCRPAVELRGLEKSILYTELLARLLFFATSHPAMIGQLCQQAQSWFRA
CPYPMLVPLAGFLQPPGGPLRATLTGCHKGITAIAWSLEEKLLVVGTQDGTMVVWDVEEQ
QVVHVLMGHTAEVRCVRVFAQGTLAISASKDHTLRLWSLLSGQEKATILDGGSPNPTEQQ
GWDLHVDEIKNVVYSTSGTKINVWDLETSKLVFCITGDASDPWVCVALLAAQGLLLALTE
GGQVSLWSSAVGKLQEKHQLCSIKEETPTCAVSIQTRARLVVGFSSGSVALVCAGEDRLL
EKLPEAVGFLAVSEDDSLLAVGFGRCVRVFLADSQDFHRFMATDLEHEDVVETAVLGPEN
NLIITASRDALIQVWSLSEQGTLLSVFESAGAPASLLVLCETLVVSASWKSSSFKAWDLR
STQKPPSPTPFLDRTGLATVSHHGSYVYFPKVGDKNKVTIWDLAEGEEQDSLDTSNEVCC
LEVAEQTKLLFTGLVSGIVLVFPLNSRQDVLCIPPPEARKAVNCMSVSKSEDRLAIAYDN
IVLVLDISPGDLCPAIEGPTYTFYTQLPETIVRVAVLADYRVVYGMSDGSLFLYDCAQSK
VFPLEAHGSRVSCVEVSHREQLAVSGAEDALLCLWDLQACREKFKMSYESSYCRGVRCAC
FSKDDKHVFTGMEDRSIIAWSALDGTLLAVQFVHAVVNRIIPTSNGFMAPTSHGYLIRER
FQCPSARASQQDPLKNFKKAVWLIKTRQREDLAEAEAPQDAEPVAVEGKESKSNKHSQVC
LIL
NT seq
4692 nt
NT seq
+upstream
nt +downstream
nt
atggacacagagcgagaagccctgcagtgcacagcctacccagaggttcagagcttctgc
cagaagcacggcttggcgttcgaggcggttgatctgaggtggggtatcccgaacacacag
gccactgactacctgaccacggaactctgcttagaagaactggagcgctgtcagaaaaca
tcagtcggcccagcttttgtggccctcctgggtgaccagtatggcccctgccctgttccc
caaaggattgaggagaaggagtgggaggcactaagggctcagctgacctccaggcctcga
gatctggagctggtgaccagacatttccagagagatgacaacaccattcctcccacctac
gtcttacagcctccaggctcaggggtggtcccagggcctgaggaggccactttaacctct
gtcctgagaggtggagcccaggaggcctggaggctaggccttatcagccaggagcaatgg
atgtgctaccatcgatcagtcattgagtgggagatcgagcatggcctactaaactcagca
cgaggggaccagggagctaccgtcttcctgagagatgttcaggacctcagcaaacacatc
ttggatgattgctgtctgaagatggtggatcggctggcagatggctgcctagataccaat
gcccagagtcttctcagcggtcttaaagggcgcatactggacgctcagcctggagcccta
aagtcccaccacctgccctggagccgtgacctggtcaaccccaagaacaagactcacgcc
cggtacctgaagcaactgagtgagcagtttgtagccaggaccaaccatcaggtcctggag
cagctccgagagctggagttggccaggcaggagctgggttggctctaccaagagatccgt
caccacctctggcagagcacagagtctaccaaggtgttctgtggccaccaggagctcctg
gcccagctcaagcagcggctcagacaggatgagagccggacgcatactcccttggttctc
tttggacccccaggcattgggaagacctccctcatgtgcaagctagcccagcaggtacca
gagctgcttggccacaagacagtggctgtcctcaggctgctggggacatcaaagctaagc
ctggatgcccgcagcctcctcaggagcctgtccttccagctgtgcttggcatatgggctg
ccattgcccccagcccaggtcctggaggctcacagcagggtgggccacttctttcacatc
ctactccacaccgtgtcccagaggaacttcgagtccctggtgttgctcctggactctgtg
gatgacctggattccatacgccatactccgagggtctcttggctgcccctcaagtgtcct
ccgagggtgcacctcatcctctctgcgtgctctggccagcaggtgttatgcaacctgcaa
cagaccctcaaggaccccagcgcctactgggaggtgaaggccctgtctggaagtcaaggc
caggagttcatccagctgctgctggctgcagagaggaggatgctgagcccgggtcagaga
gatgtcctctgggccagcctcccagagtgtggccaccccgggaggctaaggctggccttc
gaggaggcccggaagtgggcctccttcactgtgccagtgcccttggccaccacagcagag
gaagctacacatcagttctgtatccgcctggaggagacacacgggcagctgctggtggct
cgtgttctgggctacattgtgtcttccaggtatggtctctcagaggcagagctgaaggat
gtgttgtctttggatgatgaagtcttgcaggctgtgtaccgggattggacaccacccagc
aaagagctgctgcgcttcccgcccctgctgtgggtgcggctccgcagggacctgggacac
tgcctggtcaggaggcctgtggacggctgcattctactggccattgcacacagacagctg
tcccaggtgattcaagttcgatatctgtctgggcctgagagagccaagaggcatggtgtg
ctagctgaattcttctctggagcctggagccaggggatcaagaaacttatcaccctgcca
ctagtggggaagcccctgaacctggaccgcaaggtggccccacagccactgtggttctca
ggcacagtggccaactggaggaagctgaccgaactgcccttccatctgctgcatgcaggc
tgcttggaggagttaaagcaggaggtgctggggaacatgagttggatctcctgccggggc
atctctgggggcattgaggacctgctggatgattttgacatgtgtgcccctcacatggac
tctcctgaggtctatctggtcagagaagccatccagctgtgccgccctgctgtggagctc
cggggtctggagaagagcatcctatacaccgaactcctggccagactacttttcttcgct
acgtctcatccagcaatgattggacagctgtgccaacaagcccagagctggttccgtgcc
tgcccctacccaatgctggtgcccctggcaggattcctgcagccacctggtggacctctt
cgagccactctcactgggtgtcacaaaggcatcactgccatagcatggagcctggaggag
aaactcctggtggtgggcacccaggatggcaccatggttgtgtgggatgtggaggaacaa
caggtggtccacgttctaatgggacacacagctgaagtgaggtgtgtgcgagtgtttgcc
caagggactcttgccatctctgcatcaaaggaccataccctgcgtctgtggagtctgctt
tctggccaggagaaagcgaccattttggatggagggtcaccaaatccaacagagcaacag
ggctgggaccttcatgtggatgagataaagaatgttgtatactcgacatctggtacaaag
atcaacgtgtgggatctggaaacttcgaagctggttttctgtatcacaggagatgcatct
gatccctgggtctgtgtggctttgttggctgcccagggtttgctgcttgccctgaccgag
ggcggccaggtcagtctgtggagctcagctgtgggaaaactgcaggagaaacaccagttg
tgcagcatcaaagaagagacacccacctgtgccgtctccatccagactcgggcaaggctg
gtcgttggcttcagcagcggctccgtcgccctggtgtgtgctggagaagacaggctgctg
gagaagcttccagaagctgtggggttcctggcggtttccgaagacgactctctgcttgca
gtaggcttcggaagatgtgtgcgggtttttctggctgattcgcaagacttccaccggttc
atggctacggatctggaacatgaggatgtggtggagaccgcagtcttgggtcccgagaac
aatctgatcatcacagcgtcccgggatgcacttatccaggtgtggagtctgtcagaacag
gggaccctgctgagtgtctttgagagtgcgggtgcccctgcgagcctgctggtcctctgt
gagactctggtggtgtctgcgtcctggaagtcttcgtccttcaaggcctgggatctcagg
tccactcagaagccgccgtctcccacgccatttctggaccgcacgggcctcgctacagtg
tcccaccatggcagctatgtctacttccctaaggttggggacaaaaacaaagtcacgatc
tgggacctggcagaaggtgaggaacaggattccctggacacgtccaatgaggtctgctgt
ctggaggtcgccgagcagaccaagctcctcttcacaggcctggtctcggggattgtgctt
gtgttccccctgaactccaggcaagacgtgctgtgcatccccccacccgaggcgcgcaaa
gctgtcaactgcatgtccgtgagcaagagcgaggaccggctggccatcgcctatgacaac
atagtccttgtgcttgacatcagccctggggacctctgtcctgccattgaaggtcccacc
tacaccttttacacccagctgcccgagaccatagtgagagtggctgtcctggccgactac
cgtgtggtctacggcatgagtgacggcagcctcttcctgtacgattgtgcgcagtctaaa
gtgttccctctggaggcccatgggagcagggtgagctgcgtggaggtcagccacagggag
cagctagcagtgagcggggctgaggatgcactgctgtgcctctgggacctgcaagcttgc
cgggagaagttcaagatgagctacgagagctcttactgcagaggggtgcgctgtgcctgc
ttctcgaaggatgacaagcatgtgttcacaggcatggaggaccgctccatcatcgcctgg
agtgcactggatggcacccttttggctgtccagtttgttcatgctgtggtcaacagaatt
atccctacctccaatggcttcatggcccccacaagccatggctatctcatccgtgagcgc
ttccagtgcccgtcagctagagcctcccagcaagaccctctcaagaacttcaagaaggca
gtgtggctgatcaagaccaggcagagggaggatctggctgaggcagaggccccccaggat
gcagaaccagtggccgtagagggaaaggaatcaaaatcaaataaacactcacaggtctgc
ctcatactctga
DBGET
integrated database retrieval system
