Rattus norvegicus (rat): 100910104
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Entry
100910104 CDS
T01003
Symbol
Xirp1
Name
(RefSeq) xin actin-binding repeat-containing protein 1 isoform X1
KO
K27381
xin actin-binding repeat-containing protein
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100910104 (Xirp1)
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Gene cluster
GFIT
Motif
Pfam:
Xin
Motif
Other DBs
NCBI-GeneID:
100910104
NCBI-ProteinID:
XP_006244213
RGD:
1304776
Ensembl:
ENSRNOG00000037085
UniProt:
A0A8I5YBK9
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All DBs
Position
8:complement(128625111..128635011)
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AA seq
1822 aa
AA seq
DB search
MADAQMQVVHTPTIQMRTGEDLPLPPPSALEGLPPPPPKESFSKFQQQRQANELRRLYKH
IHPELRKNLEEAVAEDLAKVLGSEEPTEGDVQCMRWIFENWSLDAIGDHERPAGKEPVSG
GNVQATSRKFEEGSFTNSSDLEPGPQLSGGDVRATRQLFETKSLDALTGQEEATQMTMKE
PAVSGDVQGTRKLFETKPLDMLGSCPSIQDQSPLELRSEIQELKGDVKKTVKLFQTEPLC
AIQDAEGAIHEVKAACREEIQSNAVRSARWLFETRPLDAFNQDPSQVRVIRGISLEEGAL
PDVSATRWIFETQPLDAIREILVDEKDFQPSPDLIPPGPDVQHQRHLFETCALDTLKGER
ETEAEAPAKEEVIPGDVRSTLWLFETKPLDAFRDQVQVGHLQRVDHQKGEGPVIECLSSN
GTSALPLSQGVPQNNGPKGDVKTFKNLFETLPLDSIGQGEPSACGNINRGQRTDSTGLSE
GADAPVYAMQDSRGQLHALTSVSREQVVGGDVQGYKWMFETQPLDRLGRSPSTVDVVRGI
TRQEVVAGDVGTTRWLFETQPLEMIHQQEQQKREEEEGRGPGGPPPELPQKGDVQTIRWL
FETYPMSELAEKQESEVTGPVSKAEAQSCTWMFGSQSLNQAEGSGEQHLQTSQVQAGDRQ
TDSHVFETESLSAQGQSSGRKPVRYCSRVEIPSGQVSRQKEVFQALEAGKRGVQETVLSP
GSIPTGSVHKFTWLFENCPMGSLAAESVSGGNLQEEQPKVSADPGTPERQETAAERTLRT
LHATPGILHHGGILMEARGPGELCLAKYVLPSPGQGRPCVQKEELVCGELPRIVRQVLGR
TDVDQQGLLVQEDTAGQLRLHPLKLPGPGDPENIEDMDPELQQLLACGLGVSMAKTGLVM
QETGQGLVALTAYSLQPQPTSRGPERSSVQLLASCIDKGELHSLPSLRWEPPTDSSSVPV
TEETQRLPPTESIIRVTPLDSTMKMGHLRVSGSTPCPPLPRAAGKVVLPNGRPGAPLQEA
RKQVDISHAGQKGKAASGRPEGTIAPPLGSGAPNLQEAMQNLRLATAEAQSLHQQVLSRH
AQGSDPAATSISAQDVLQVPTPTTTQGSIMPVAGRDARITAVPRKVSGDNKAVPRGLPRG
RVTIQDGIYAAHPVRTSDLPGAIQPSEKEPQPRDSPPQADQGQSPRPEYHEPGGHSQRAW
GPLGKVMPQIWPECLQAADTSLKTVPLTHHTLTPKPQAAGDSLHSHNASPPTLPAAVTEE
PDHPAQGHHQKDSVQQASKPLREPLLHSHNRPAGQKTLEGSETKLSKAESTVLPRKKPPV
PPKPAHLSQVHPPHRLPKPLAASASISEAGQDHKPGEPGVANPGSAKAPTIAGQGCLPLA
ECSKGQKQPMRQYPLSTTASRPSGGQTSNSNSQSPESRKLTILNNDNDVSPPQKHPSSPK
QQPMDGSKQRTPESPEIVQGSHQELQGLLSQVQTLEKEAAHTVNVQTLRKLFEGAPQLAG
GTRQVPTAPHKTEVSVEQAFGELTRVSSKVAQLKEQTLARLLDIEETVHKALSSIFSFQS
EGHTSSPPQGSAKDLGVKKVSTSNRARPMGSNQVKEPPAVENQEKVESRPEAQGQDEIRN
HAEARGQAAVNVLPSRRLETARAEPGLQQVSPSCRGSSSPTFISIQSAAKTLLDASSPQG
SHSISGKNTHLAQDISQALLYQRDIQDQAGTKEMAIKGSVPTGQQENVLEFQTGSATSKS
YGATKTVTEQYEEMDQFGNTVLTSSTTITQQAEPLMDPRPQLGLYTFPMLRQFLHSPSRF
NSDLAGAEIPWVPCSHFHPAAQ
NT seq
5469 nt
NT seq
+upstream
nt +downstream
nt
atggccgatgcccagatgcaggtagttcatacaccaaccatccaaatgaggactggagag
gacctgccccttccccctccctcagccctagagggtctgccgccaccgccccccaaagaa
tctttctccaagttccagcagcagcggcaagccaacgagcttcgccgtctctacaaacac
atccaccctgagcttcggaagaacctcgaggaggctgtagccgaggacctggccaaggta
ctcggttcggaggagcccaccgagggcgatgtgcaatgtatgcgctggatctttgagaac
tggagtttggatgccattggcgaccacgagaggccagctggcaaggagcctgtgtcaggt
ggcaacgttcaggccacctctcggaagtttgaggaaggctcctttaccaacagctcagat
ctggagccaggaccccagctgtcagggggtgacgtccgagctaccagacagctgtttgag
accaagtcactggatgcactgacaggccaggaagaggcaacacagatgaccatgaaggaa
cctgcagtctctggagatgtacagggaaccagaaaactctttgagactaagcccctcgac
atgctgggctcctgcccctctatccaggaccagagccctttagagctgcgctcagagatt
caggagctgaagggtgatgtgaagaagacggtgaagctgtttcagacggagcctctatgt
gccatccaggatgcagagggcgccatccatgaagtcaaggctgcctgtcgggaggagatc
cagagcaatgcagtgaggtcagctcgctggctctttgagacccgacctctggacgccttc
aaccaggaccccagccaggtgagggtgattcgggggatctccctcgaggagggagccctg
cccgacgtcagtgcaactcgctggatcttcgagacgcagcctctggatgccattcgtgag
atcttggtggacgagaaggacttccagccatctccagatctcatccctcctggtccagac
gttcagcatcagcgacatctgtttgagacctgcgccctggacactctgaagggagaaaga
gaaaccgaggcagaggctccagccaaggaggaggtgattcctggtgacgtccgctctaca
ctctggctgtttgaaacaaaacccctggatgctttcagagaccaggtccaagtgggtcac
ctgcaacgggtggatcaccagaagggtgaggggcctgtgatagagtgtctgtccagtaac
ggcacttcagcgctgcctctgtctcagggtgtcccccagaacaatgggccgaaaggggat
gtgaaaaccttcaagaatctttttgagacccttcccttagacagcattgggcagggtgag
ccttcagcctgtggaaacataaacagaggacaaaggactgattctactgggctgtccgag
ggcgccgatgcccccgtatatgctatgcaggacagcagaggacagcttcatgccctgact
tctgtcagcagagagcaggtagttggaggtgatgtacaaggctacaagtggatgtttgag
acacagcccctggaccggctgggcagaagccccagtaccgtggatgtggtgcgaggcatc
acccggcaagaagtggtggctggggatgtaggcaccactcggtggctctttgagacgcaa
ccactggagatgatccaccaacaagagcagcagaagcgagaggaggaggaggggaggggt
ccaggaggcccccctcctgagctcccccagaagggcgatgtacaaaccatccgctggcta
tttgagacctaccctatgagcgagttggcagagaagcaggaatctgaggtcacaggccct
gtgagcaaggcagaggcacagtcatgcacctggatgtttgggtcccaatctctgaaccag
gcagagggctctggggagcagcacttgcaaaccagccaggtccaggctggagacagacag
acagacagccatgtctttgagactgaatctctgtcagcccagggccagtccagtgggaga
aagcctgtaaggtactgcagccgagtggagattccttccgggcaggtatctcggcagaaa
gaagttttccaagccctggaagcaggcaagaggggggtacaggagactgttttaagcccc
ggatccatccccacaggctccgtgcataaattcacctggctctttgaaaactgccccatg
ggctccctggcagcagagagtgtcagtgggggcaacctccaggaagaacagcccaaagtc
tctgcagaccctgggaccccagagaggcaggagacagcagccgagagaacccttcggact
ttgcatgccacccctggcatcctgcaccacggagggatcctcatggaagcccgagggcca
ggggagctctgccttgccaagtatgtgctcccaagcccagggcaggggcgcccctgtgta
cagaaggaggagctggtgtgcggtgagctccccaggatcgtccgtcaagtgctgggccgg
acagatgtggaccagcagggactgctggttcaggaggacacagctggccaactccgactc
cacccactcaaactgccagggcctggtgaccctgagaatattgaagacatggacccggag
ctccagcagctgctggcctgtggcctgggagtctctatggcaaagacggggctggtgatg
caagaaacaggacagggcctagtggcattgactgcctactccctccagccccagccaacc
agcaggggccctgaaagaagcagtgtgcagctgctggccagctgcatagacaaaggagaa
ctgcacagccttcccagtttgcggtgggagccgccaacagactcaagttcagtaccagtt
actgaggagacccagaggcttcccccaactgagagcatcatacgcgtcaccccattagac
tccaccatgaagatggggcatctgagagtctcaggatccacaccctgcccacctctacct
cgggcagctggaaaagtggtccttccaaatgggagaccgggagcaccattgcaggaagca
aggaagcaagtggatatcagccatgctgggcagaaagggaaggcagcctcaggaagacca
gaaggaaccattgctcctcctttagggtctggggctccaaatctccaggaggccatgcaa
aatctgcgtttggcaactgctgaggcccaaagcctgcaccagcaggttctgagcaggcat
gcacagggctctgaccctgcagccacctccatatctgctcaagatgttctgcaagtgccg
actcctaccactacccaaggtagcatcatgcctgtggctggaagggacgccaggatcaca
gcggtccccagaaaggtcagtggagacaacaaagcagtccccagagggctgcctaggggg
cgggtgaccatacaggatggtatctatgctgctcaccctgtgagaacctctgacctacct
ggggccatccagccttctgaaaaagaaccccagccaagggacagcccaccccaggcagac
caaggtcagagtcccaggccagaatatcacgagcctgggggtcactcacaaagggcttgg
ggacctctggggaaagtgatgccacaaatctggcctgagtgcctccaggcagcagacacc
tccctgaagactgtccctctaactcaccacactctgacacctaaaccccaggctgcaggt
gacagcctgcactcccataatgcctctcctcctactctcccagctgctgtgacagaagaa
ccagaccacccagctcaaggccaccaccagaaggactccgtccagcaggcctccaagccc
ctgcgggaaccccttcttcacagtcacaacagacctgctggccagaaaacccttgaaggg
tcagagacaaagctctctaaagcggaatccactgtgcttccaagaaagaaacccccagtg
cctccgaaacctgcccatctaagccaagtccacccacctcataggctgcccaagccctta
gcagcctctgccagcatctcagaagcaggacaagaccataagccaggtgagccaggtgta
gccaaccctgggtcggccaaagctcccacaatagcaggtcagggctgcctgcccctggct
gagtgctccaaggggcagaaacagcctatgcgccagtatccactcagcaccacagcttcc
agacctagcgggggccaaacaagcaacagcaacagccagagccctgagtctcgcaagttg
accattctcaacaatgacaatgacgtcagcccaccacaaaagcaccctagctccccaaaa
cagcagcctatggatggttccaagcagaggacccctgagagcccagagattgttcagggc
agccatcaagagctccagggcctcctgagccaagtgcaaaccctggagaaggaagcagcc
cacaccgtgaatgtgcagaccctgcggaagctctttgagggtgcaccccagctggcaggg
ggtacccgtcaggttcccacagctcctcacaagactgaggtctcagtggagcaggccttt
ggggagctaactcgggtgagttcaaaggttgcccagctgaaagaacagaccctagccagg
ctgctggacatcgaagaaacagtgcacaaggctctgagctccatatttagcttccagtcc
gagggtcacacaagcagccctccacagggaagtgcaaaggatctcggtgtgaaaaaggtc
tccaccagtaacagagccagaccgatgggctccaaccaggtcaaagagccacctgcagtc
gaaaaccaagaaaaggttgagagccgtcctgaggcgcaaggtcaagatgagattagaaat
catgcagaggccagaggtcaggcagcagtgaatgtcctgccctccaggaggctggagacg
gcaagagccgagcctggcctccaacaagtctcaccttcctgcaggggatcctcctctcca
actttcatctctatccaatcagctgcaaagacgcttctagatgcttccagccctcaggga
agccattctatctcagggaaaaatacacacctagctcaggacataagccaagccctgctc
taccagagagatatccaggatcaggctgggacaaaggagatggccatcaagggctctgtg
cccacagggcagcaagagaatgttctggaattccagactgggtctgctacctccaagtcc
tatggagccacgaaaacagtgactgaacagtatgaggagatggaccaatttgggaataca
gtcctcacttcctccaccaccatcacccagcaggcagagcctctgatggaccccaggccc
caactcgggctctacacttttcccatgctaaggcagttcctccacagtccctccaggttc
aacagcgacctggctggtgccgagataccatgggttccctgtagccacttccatccggct
gcccagtga
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integrated database retrieval system
