Rattus norvegicus (rat): 100911668
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Entry
100911668 CDS
T01003
Symbol
Hoxa10
Name
(RefSeq) homeobox protein Hox-A10 isoform 1
KO
K17443
homrobox protein Hox-A10
Organism
rno
Rattus norvegicus (rat)
Pathway
rno05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
100911668 (Hoxa10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rno03000
]
100911668 (Hoxa10)
Transcription factors [BR:
rno03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
100911668 (Hoxa10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
100911668
NCBI-ProteinID:
NP_001389216
RGD:
9410935
Ensembl:
ENSRNOG00000065199
UniProt:
D3ZHM5
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Position
4:complement(82662204..82671490)
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AA seq
413 aa
AA seq
DB search
MSARKGYLLPSPNYPTTMSCSESPAANSFLVDSLISSGRGEAGGGGGSAGGGGGGYYAHG
GVYLPPASDLPYGLQSCGLFPALGNKRNEAPSPGGGGGGGGGGLGPGAHGYAPAPLDLWL
DAPRSCRMEPPDGPPPPQPQPQQQQQPPPPPPQPPQPPPQATSCSFAQNIKEESSYCLYD
SADKCPKGSAAADLAPFPRGPPPDGCALGASSGVPVPGYFRLSQAYGTAKGFGSGGTQQL
ASPFPAQPPGRGFDPPSALASGSAEAAGKERVLDSTPPPTLVCAGGGSSQADEEAHASSS
AAEELSPAPSENSKASPEKDSLGNSKSENAANWLTAKSGRKKRCPYTKHQTLELEKEFLF
NMYLTRERRLEISRSVHLTDRQVKIWFQNRRMKLKKMNRENRIRELTANFNFS
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccagaaagggctatctgctcccttcgccaaattatcccacaacaatgtcatgc
tcggagagccctgccgcgaactcttttttggtcgactcgctcatcagctcaggcagaggc
gaggcgggtggcggtggcggtagcgcggggggcggtggaggcggctactacgcccacggc
ggggtctacctgccgcctgccagcgaccttccctacgggctgcaaagctgcgggctcttc
cccgcgctgggcaacaagcgtaatgaggcgccgtccccgggaggcggtggcggtggcggc
ggcgggggcctgggtcccggggcgcatggctacgcgcccgcgcccctagacctgtggctg
gatgcgccccgttcctgccggatggagccgcccgacgggccgccgccaccgcagccacag
ccccaacaacagcagcagccgccgccgcccccgccgcagccaccccaacccccgccacag
gccacttcgtgttcttttgcgcagaacatcaaagaagagagctcctactgcctctacgat
tctgcggacaaatgccccaaaggctcggccgccgccgatctggcccctttcccgcggggc
ccgccgcccgacggctgcgccctgggcgcctccagcggagtgccagtgccgggctacttc
cgcctgtcgcaggcctacggcacggccaagggcttcggcagcggcggcacacagcagctc
gctagtccctttcctgcgcagcccccggggcgcggcttcgacccaccgtccgcactggcc
tctggctcggccgaggcagcgggaaaggagcgagtcctagactccacgccaccacccacg
ctggtttgcgccggtggcggaagctcgcaggccgacgaggaggcgcacgcgtcatcctcg
gcggctgaggagctgtccccggccccttccgaaaacagtaaagcctctccggagaaggac
tccctgggcaattccaaaagtgaaaatgcagccaactggctcacagcaaagagcggccgg
aagaaacgctgcccttacacgaagcaccagacgctggagctggagaaggagtttctattc
aacatgtaccttactcgagagcggcgcctagagatcagccgtagcgtccacctcacggac
agacaagtgaaaatctggtttcagaatcgcaggatgaaactgaagaaaatgaaccgagaa
aaccgaatccgagagctcacagccaactttaatttttcctga
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