Rattus norvegicus (rat): 100912013
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Entry
100912013 CDS
T01003
Symbol
Nlrp4b
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 4B
KO
K22265
NACHT, LRR and PYD domains-containing protein 4
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rno04131
]
100912013 (Nlrp4b)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
rno04054
]
100912013 (Nlrp4b)
Membrane trafficking [BR:
rno04131
]
Autophagy
Other autophagy associated proteins
Others
100912013 (Nlrp4b)
Pattern recognition receptors [BR:
rno04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
100912013 (Nlrp4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
PYRIN
NOD2_WH
LRR_6
AAA_16
PIF1
NB-ARC
nSTAND3
AAA_30
Motif
Other DBs
NCBI-GeneID:
100912013
NCBI-ProteinID:
XP_063136648
RGD:
1559894
Ensembl:
ENSRNOG00000015527
LinkDB
All DBs
Position
1:complement(79498373..79530131)
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AA seq
918 aa
AA seq
DB search
MASLFSDFGFMWYWKELNKVEFMKFKELLILEILQMGLKQISWTEVKNASREDLAILLVK
YCEGKQAWDTTFKVLQKISRHDLTERATGEIAAHANIYRAHLKKKLTRDCSRKFSISIQN
FFQDEYDHLENLLIPKVTEEKPQLVFLKGIAGIGKTILLKNLMIVWSEGLVFQNKFSYIF
YFCCQDVKQLKTTSLTELISREWPSSSAPIEEILSQPEKLLFIIDSLEGMEWDFTKQESE
LCDNCLEKQPVNVLLSSLLKKKILPESSLLISATFETFEELKDWIEYTNVRTITGFKESN
IKMYFHSLFQDRNRALEAFSFVRENEQLFTLCQAPVICCMVATCLKNEIEKGKDPVSICR
RTTSLYTTHIFNLFIPPNVQYPSKKSQDQLQGLCFLAVEGMWTDISVFSEETLRRNGILD
SDIPTLLDIGILEQSRESQNSYIFFHPSVQEFCAAMFYLLQTHMNHPSPDVLHVEKLLFS
FLKEVNTQWIFLGRFIFGLLNELEHEKLEAFFGYQLSQQLKQELFEWLELLLDPEVKVNT
MKFFYCLFEMEEEVFVQSAMNCREEIDVVAKDYYDFIVAAYCLNHGSALRDLSISTQNVL
NEKLNQRYMENLLMLWHNICSVFARNKDIHILQMKDTIFNEPVFQILYNYLKNSSCILEV
LVANDVSFLCDKYLFFDLIQSYNLELLDLSGTFLSHSDVVILCNILNKAEYKIQELELAN
CSLSEQSWKYISDVLCQNKTLRHLDISSNDLKDEGLKVLCKALTLPDSVLLTLSVKACFI
TTVGCQYLAEVLRNNHKLMFLTLSENKLEDSGVKLLCDAIKHPRCQLAQLDLEACELTGA
CCEDLASTFTQCKTLGWINLVKNALDFNGLVVLCKALKQKTSNLKELRLRITDFDNKSQT
FLLSEEKGNKFLNIENDE
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atggcatctctcttttctgattttggctttatgtggtactggaaagagctaaacaaggtg
gaattcatgaagtttaaggaattactcatacttgagattctgcaaatggggctaaaacag
atttcttggactgaagtaaagaatgcatctcgggaagatcttgccatcttactggtgaaa
tattgtgaggggaagcaagcctgggacacaaccttcaaagttctccagaaaatcagtaga
catgatctcactgagagggcaacaggggagattgctgcacacgcaaatatatatcgagct
catttaaagaagaagctgacccgtgattgttctagaaagttcagcattagtattcagaat
ttcttccaggatgaatatgatcatcttgagaaccttctcataccaaaggtaactgaagaa
aagccacaactggtgttcctgaaaggtatagctggaattggcaagactattctgttgaaa
aatttaatgattgtctggtcagaaggccttgtgtttcagaacaaattctcctatatcttc
tacttctgttgtcaagatgtgaagcaattgaagaccacaagcctgactgaactgatctcc
agagagtggcccagttcctcagctcccatagaggagatcctatcccaacctgaaaagctc
ttatttatcattgacagtttagaagggatggaatgggattttaccaaacaggaatcagaa
ctgtgtgacaattgcttagagaagcagccagtgaatgtattgctgagcagtttgctcaag
aagaagatactccctgaatcatctcttcttatctcagctacttttgagacttttgaggaa
ttgaaggactggattgagtacacaaatgtgagaacaataactggattcaaggaaagcaat
attaagatgtatttccatagcttgttccaagataggaacagagccttggaggccttcagt
tttgtaagagaaaatgagcagctgttcactttatgtcaggcccctgtgatctgctgcatg
gtagctacttgtcttaagaatgagatagagaaggggaaagatccagtctctatctgtcga
cgtaccacctctctgtacaccactcacatcttcaatttgttcattcctccaaatgtccaa
tacccaagtaagaaaagccaagaccaactacagggcttgtgttttctagcagtggagggc
atgtggactgacatatctgtgtttagtgaggagactctgaggagaaatggaatcctggac
tctgacatccctacattgttggacattggaattcttgaacagagcagggagtctcaaaat
tcttacatattcttccacccgtctgtccaggagttctgtgctgccatgttttatctgcta
cagacccacatgaaccaccctagtccggatgttctccatgtagaaaaactattgttttct
tttctaaaggaggtcaatacacagtggatttttttgggtcgtttcatatttggccttttg
aatgaattggaacatgaaaaactggaagcattttttggctaccagttgtctcagcaacta
aaacaagaattgtttgagtggctggaacttctgttggaccctgaagttaaagtaaataca
atgaagttcttttactgtctgtttgagatggaagaggaagtcttcgtacagtcagcaatg
aactgtagggaagagattgacgttgtggctaaggattattatgattttatcgttgctgcc
tactgcttaaaccatggttctgcactgagagacttatctatttcaacccaaaatgtccta
aatgaaaagctgaatcagagatatatggaaaatctactcatgctttggcataatatatgc
tctgtgtttgcaaggaataaggacattcacatcctccaaatgaaagacactattttcaat
gagccagtttttcaaatcttatataattatctaaagaactccagctgtatccttgaagta
cttgtggcaaatgatgtgtcctttttatgcgataagtacctattttttgatttgattcaa
agctacaatttggaactcttggacctcagcggcacattcctctcccatagtgatgtggta
atattgtgtaatatcttgaacaaggcagagtacaaaatacaagaactcgagttagccaac
tgttccctcagtgagcaatcttggaaatacatttctgatgttctttgtcagaacaaaacc
ctgagacacctagacatcagctccaatgacctgaaggatgaaggactgaaagttctctgt
aaggctctcactctcccagacagtgtactgttaacactaagtgtgaaagcttgtttcatc
accactgtaggctgccagtacctggctgaagtcctcaggaacaaccataaactgatgttc
ctaacactttcagagaataagctagaagactctggtgtgaagctcctgtgtgatgctata
aaacatcccagatgccaattagctcaactcgacttggaagcctgtgaacttactggtgcc
tgttgtgaggatcttgcttctacttttacccagtgtaaaaccttgggttggatcaatctg
gtgaagaacgctttggacttcaatggattggttgtgctatgcaaggctctgaaacagaaa
acctctaacctgaaagaactaagactgcgaataactgactttgataacaaatcccagaca
tttctactttctgaggaaaagggaaataaattcttgaatatcgaaaatgatgagtaa
DBGET
integrated database retrieval system
