Rattus norvegicus (rat): 100912356
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Entry
100912356 CDS
T01003
Name
(RefSeq) interferon alpha-1-like precursor
KO
K05414
interferon alpha
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04060
Cytokine-cytokine receptor interaction
rno04151
PI3K-Akt signaling pathway
rno04217
Necroptosis
rno04620
Toll-like receptor signaling pathway
rno04621
NOD-like receptor signaling pathway
rno04622
RIG-I-like receptor signaling pathway
rno04623
Cytosolic DNA-sensing pathway
rno04630
JAK-STAT signaling pathway
rno04650
Natural killer cell mediated cytotoxicity
rno04936
Alcoholic liver disease
rno05152
Tuberculosis
rno05160
Hepatitis C
rno05161
Hepatitis B
rno05162
Measles
rno05163
Human cytomegalovirus infection
rno05164
Influenza A
rno05165
Human papillomavirus infection
rno05167
Kaposi sarcoma-associated herpesvirus infection
rno05168
Herpes simplex virus 1 infection
rno05169
Epstein-Barr virus infection
rno05170
Human immunodeficiency virus 1 infection
rno05171
Coronavirus disease - COVID-19
rno05200
Pathways in cancer
rno05320
Autoimmune thyroid disease
rno05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09132 Signal transduction
04630 JAK-STAT signaling pathway
100912356
04151 PI3K-Akt signaling pathway
100912356
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
100912356
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
100912356
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
100912356
04621 NOD-like receptor signaling pathway
100912356
04622 RIG-I-like receptor signaling pathway
100912356
04623 Cytosolic DNA-sensing pathway
100912356
04650 Natural killer cell mediated cytotoxicity
100912356
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100912356
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
100912356
05161 Hepatitis B
100912356
05160 Hepatitis C
100912356
05171 Coronavirus disease - COVID-19
100912356
05164 Influenza A
100912356
05162 Measles
100912356
05168 Herpes simplex virus 1 infection
100912356
05163 Human cytomegalovirus infection
100912356
05167 Kaposi sarcoma-associated herpesvirus infection
100912356
05169 Epstein-Barr virus infection
100912356
05165 Human papillomavirus infection
100912356
09171 Infectious disease: bacterial
05152 Tuberculosis
100912356
09163 Immune disease
05320 Autoimmune thyroid disease
100912356
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
100912356
09167 Endocrine and metabolic disease
04936 Alcoholic liver disease
100912356
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
rno04052
]
100912356
Cytokines and neuropeptides [BR:
rno04052
]
Cytokines
Interferons
100912356
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Interferon
Motif
Other DBs
NCBI-GeneID:
100912356
NCBI-ProteinID:
NP_001396331
RGD:
6487214
LinkDB
All DBs
Position
5:complement(108343570..108346248)
Genome browser
AA seq
189 aa
AA seq
DB search
MAKLCAFLVVLVVMSHWSTCCLGCDLPHTHNLRNKRAFTLLAQMKRLSPVSCLKDRQDFG
FRLEKVGAQQIQKAQAISILHGLIQHILSLFTSKESSTAWDATLLDSFCNDLQQQLSGLQ
ACQMQQMGVQEPPLAQEDSLLAVREYFHRITVYLREKKHSPCAWEVVRAEVWRALSSSVH
LLSRLREEK
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atggctaagctctgtgctttcctagtggtcctggtggtgatgagccactggtcaacctgc
tgtctaggatgtgatctgcctcatactcataacctcaggaacaagagagccttcacactc
ctggcacaaatgaagagactctcccctgtctcctgcctgaaggacagacaggactttgga
ttccgtttggagaaggtgggtgcccagcagatccagaaggctcaagccatctctatccta
catgggctgatccagcatatcctcagcctcttcacatcaaaggagtcatctactgcttgg
gatgcaaccctcctagactcattctgcaatgacctccagcagcagctgagtggtctgcaa
gcctgtcagatgcagcaaatgggggtgcaggaacctcccctggcccaggaagactcccta
ctggctgtgcgggaatacttccacaggattaccgtgtacctgagagagaagaaacacagc
ccctgtgcctgggaggtggtcagagcagaagtctggagagccctgtcttcctcagtccac
ttgctgtcaagactgagagaagagaagtga
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integrated database retrieval system