Rattus norvegicus (rat): 100912416
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Entry
100912416 CDS
T01003
Symbol
Tcaf2c
Name
(RefSeq) TRPM8 channel-associated factor 2
KO
K27948
TRPM8 channel-associated factor
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rno01002
]
100912416 (Tcaf2c)
Peptidases and inhibitors [BR:
rno01002
]
Metallo peptidases
Family M98
100912416 (Tcaf2c)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M60
M60-like_N
Phage_Mu_Gp48
Motif
Other DBs
NCBI-GeneID:
100912416
NCBI-ProteinID:
XP_063143015
RGD:
1591778
Ensembl:
ENSRNOG00000066894
Vega:
OTTRNOG00000001054
LinkDB
All DBs
Position
4:complement(72520327..72543150)
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AA seq
919 aa
AA seq
DB search
MATTPDAAFEALMNGVTSWDLPKEFTPSELLLIGEAAFPVMVNDKGQVLIAASFYGQGRL
VVLSHEGYLLHAGLAPFLLNAVSWLCPSPEAPIAVHSSLASLVNILRDSGVNALVQPEPG
EALGVFCIDAYNDTLTEKLVQFVKHGGGLLIGGQACNWASQQGSDKVLFSFPGNQVTSVA
GVYFTDVYGGINRFKVSKKVPKIPLHIRCWEELRRDQEQLLDGISMLDIRTGGVPSQLLV
HGSLAFPVGLDNSFLSCFLAAARYGCGRVVLAAHEAMLCAPKMEPFLLNAIRWLSRDQGK
TIGVNKSLKNLNSLLLKHGVKCSLESHLTSDMGVYCCVAYSDQDAKKIQEFVAEGGGLLI
GGQSWWWASQNQGSSALRSFPGNVVLNPFGLSILPQTISPGCFPVLPIDIRNYHFRRALS
EFQAMVNHKGGNLEKKYFGKLGVDGAGFLQIPAKGVPAYISVHRILRKMLRQAGLPAVSK
NNPVSSQSCEAALLCLATELAHSGTDCSQIAHNHGTQTCSSDLCSSEHPITVEINGTNTG
DSDVWMSTGLYLLEGQSTEISLSEPAASAGLKVQIGCHTDNLSHARQLFRAPVVTYQCCM
DRTQRSVSCLWGGLLYIIVPKGCQLGPVSVTITKAVPAPYYKLGKTSLEEWKSCMQKNLG
PWGELATDSVILTVPTESLKNLEDPAPLLQLWDEIMKAVAKLAAQPFPFERPERIVTDVQ
ISNGWMHSGYPIMCHVESVQELVSLADIRSKGLWGPIHELGHNQQRSGWEFRPHTTEATC
NLWSVYVHETVLGIPRAQAHPQLKPEEREKRIKEHLQKGAPLSDWKVWTALETYLQLQEV
FGWEPFMNLFAEYQCIVHIPKDNESKMNLWLKLFSEKVQKNLVPFFEAWGWPIQKPVAEA
LACFPSWQDHPLKMYIGME
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaactcctgatgctgcttttgaggccctcatgaatggagtgaccagctgggat
ctccctaaagaattcactcccagtgaactccttcttattggagaggcagccttcccagtg
atggtgaacgacaagggccaggtgctcattgctgcctctttctatggccaaggccgcctg
gtggtcctatcccatgagggctacctgctgcatgctggcttggctccatttcttctcaat
gcagtgagctggctctgcccctccccggaggctcccattgcagtgcattcttccttggca
tccttagttaacatcctcagggactctggggtaaacgcactggttcagcctgagcctgga
gaggctctgggagttttttgcattgatgcctacaatgacaccttgaccgagaagctagtt
cagtttgtgaagcatggtgggggcttgctcattggaggccaggcctgcaattgggccagt
caacaggggagtgacaaagtgctgttcagtttccctgggaaccaggtgacaagtgtggct
ggagtgtacttcactgatgtctatgggggtataaaccggttcaaggtctctaagaaggta
cccaagatccccctccatatcaggtgttgggaggagctcaggcgtgaccaggagcagctt
ctggatgggatctctatgttggacatcaggactgggggtgtcccctcacagctgttggta
catgggtccctggccttccctgtgggccttgataactccttccttagctgcttcctagca
gctgcccgctatggttgtggtcgggtggtgttggctgcacacgaggccatgctctgtgct
cctaaaatggaaccctttttgctcaatgctatacgttggttgtccagagaccagggaaag
actattggggtgaacaaaagtctcaagaatctgaattccctattgttgaagcatggagtg
aagtgcagcctggagtcccatttgaccagtgatatgggtgtctactgctgtgtagcttat
agtgaccaggatgccaagaaaatacaggagtttgtagcagagggtggggggttgctcatt
ggtggtcagtcctggtggtgggcttcccagaaccaaggcagctctgcattgcgtagtttc
cctgggaatgtcgtcctcaatccctttggcctcagcattttgcctcagaccatcagccca
ggctgtttccctgtccttcctatagacataaggaactaccattttcgaagggctctttct
gagttccaggctatggtgaaccacaagggtgggaacttggaaaagaagtattttggaaaa
ttgggagtagatggagcaggctttcttcagattcctgcaaagggagttcctgcttatata
tctgtgcaccggatcctgaggaagatgctacgtcaggcaggcctccctgctgtgagcaag
aataacccggtgtccagtcagtcctgtgaggctgcactgctctgtctagccacagagctg
gcacattctgggactgattgctcccagatagctcataaccatggcactcagacctgctcc
tctgatctctgctcctcagaacatcccattacagtggagatcaatggaaccaacacaggt
gacagtgatgtctggatgagtactgggctctacctcctggaaggacaaagcacagagatt
tctctctctgaacctgctgcctcggctggcctgaaggtgcagatcggatgtcacactgat
aatctcagtcatgccagacagctgttccgagcccctgtggtaacgtatcagtgctgtatg
gacagaacccaacggtcagtctcctgcctctggggtggtctcctgtacatcattgtgccc
aaaggctgtcaacttggccctgtatctgtcaccatcacaaaggcagtgcctgccccatac
tacaagctaggtaagacatcactggaggagtggaagagctgcatgcagaagaacctgggg
ccctggggagagttggccacagacagtgtcatcctgacagtgccaaccgaaagcctgaag
aatctggaagatccagctcctctgctccaactctgggatgagattatgaaggctgtggcc
aagctggcagcccagcccttcccttttgaaaggcctgagagaattgtcactgatgttcag
atatcaaatggctggatgcattcaggataccccatcatgtgccatgtggaatctgtgcaa
gaactagtcagtttggcagacataagaagtaagggcctatggggacccatccatgagctg
ggccacaatcagcaacgcagtggttgggagttccgcccacataccaccgaggccacctgc
aatctctggtcagtctatgttcatgagacagtcctggggattcccagagctcaggcccac
cctcaactgaaacctgaagaaagagagaagaggatcaaagaacaccttcagaagggagca
cccctgagtgactggaaggtttggacagcactggagacatatctgcagctccaggaggtc
tttgggtgggagccattcatgaacctctttgctgaataccaatgcattgttcacatcccc
aaagacaatgagagcaagatgaacttatggctgaagttgttctctgagaaagtgcagaag
aacctggttcctttctttgaagcctggggctggcctatccagaagccagtggctgaagcc
ctggcctgctttccttcctggcaggatcaccccttgaagatgtacattgggatggagtag
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