Rattus norvegicus (rat): 102550189
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Entry
102550189 CDS
T01003
Symbol
Samd1
Name
(RefSeq) sterile alpha motif domain-containing protein 1 isoform X1
KO
K26266
sterile alpha motif domain-containing protein 1
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rno03036
]
102550189 (Samd1)
Chromosome and associated proteins [BR:
rno03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Other PRC associated proteins
102550189 (Samd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAMD1_WH
SAMD1_SHD
SAM_1
SAM_PNT
SAM_2
PTPRCAP
Motif
Other DBs
NCBI-GeneID:
102550189
NCBI-ProteinID:
XP_038954072
RGD:
7529921
Ensembl:
ENSRNOG00000065861
UniProt:
A0A8I6AKG2
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All DBs
Position
19:complement(41055898..41059243)
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AA seq
519 aa
AA seq
DB search
MAGPPALPPPETAAAATTAAAASSSAASPHYQEWILDTIDSLRSRKARPDLERICRMVRR
RHGPEPERTRAELEKLIQQRAVLRVSYKGSISYRNAARVQPPRRGATPPAPPRVPRGGPA
APPPTPAPPPAPVAAPTRAPRAAAATAPPSPGPAQPGPRAQRAAPLAAPPPAPAAPPAAA
PPAGPRRAPPPAVAAREPPAPPQQQQPPPPQPQPPPEGGAARAGGPARPVSLREVVRYLG
GSGGASGRLTRGRVQGLLEEEAARGRLERTRLGALALPRGDRPGRAPPAASARAARSKRG
GEERVFEKEEEDDEEDDEEEEEDNVSEGSEVPESDRPAGAQHHQINGERGPQSAKERVKE
WSPCGPFQGQDEGRGPAPGSCTHQVFSMTAMNKEGGSACVTAAPDSPSPVPLPPGKPALP
GADGTPFGCPPGRKEKPTDPVEWTVMDVVEYFTEAGFPEQATAFQEQEIDGKSLLLMQRT
DVLTGLSIRLGPALKIYEHHIKVLQQGHFEDDDPDGFLG
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggcggggcccccggccctacccccgccggagacggcggcggccgccaccacggcggcc
gccgcctcgtcgtccgccgcttccccgcactaccaagagtggattctggacaccatcgac
tcgctgcgctcgcgcaaggcgcggccggacctggagcgcatctgccggatggtgcggcgg
cggcacggcccggagccggagcgcacgcgcgcggagctcgagaaactgatccagcagcgc
gccgtgctccgggtcagctacaaggggagcatctcgtaccgcaacgcggcgcgcgtccag
ccgccccgccgcggagccaccccacccgccccgccgcgcgtcccccgcgggggccccgcc
gcgccgccgcccacgcccgccccaccgcccgcgcccgtcgccgccccgacccgggcgccc
cgcgcggccgccgccacagcgcccccttctcccggccccgcgcagccgggtccccgggcg
cagcgggccgcgcccctggccgctccgccaccagcgcccgccgcgcccccggccgcggcg
cccccagccggcccgcgccgcgcaccgccgcccgccgtcgccgcccgggagccgccggcg
ccgccacagcagcagcagccgccaccgccgcagccacagccgccgccggaggggggcgcg
gcgcgggcgggcggcccggcgcggcccgtgagcctgcgggaagtcgtgcgctacctcggg
ggcagtggcggcgccagcggccgcctcacccgcggccgcgtgcaggggctgctggaagag
gaagcggcgcgaggccgtctggagcgcacccgcctgggagcgctcgcactaccccgcgga
gacaggccgggacgggcgccgccggccgctagcgcacgcgcggcgcggagcaagagaggt
ggagaagaacgggtgtttgagaaagaagaggaagatgacgaagaagatgacgaagaggag
gaggaggacaatgtatctgagggctcggaagtgcccgagagtgaccgccccgcaggtgct
cagcaccaccagattaatggagagcggggccctcagagtgctaaggagagggtcaaggag
tggtcgccctgtggacccttccagggccaggatgaagggcggggaccagcacctggcagc
tgcacacaccaggtgttctcgatgacagctatgaataaagaagggggatcggcttgtgtt
acagctgctccagattctccatctcctgtgcctttgcctccaggaaaaccagccctacct
ggggctgatgggacaccatttggctgtcctcctgggcgcaaggagaagccaacggaccca
gtggagtggacagtcatggatgtggtggaatacttcactgaggcaggcttcccagagcag
gccactgctttccaagagcaggaaattgatggcaagtctttgttgctcatgcaacggaca
gatgtgctcactggcctgtccatccgcctgggcccagccctgaagatctacgagcaccac
atcaaggtgcttcagcaaggccactttgaggacgatgatcctgatggctttctaggctga
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