Rattus norvegicus (rat): 102552895
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Entry
102552895 CDS
T01003
Symbol
Podn
Name
(RefSeq) podocan precursor
KO
K25037
podocan
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
rno00535
]
102552895 (Podn)
Proteoglycans [BR:
rno00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class V
102552895 (Podn)
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Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_14
LRR_5
LRR_9
LRR_LRWD1
LRRNT
Motif
Other DBs
NCBI-GeneID:
102552895
NCBI-ProteinID:
NP_001407952
RGD:
7545693
Ensembl:
ENSRNOG00000011413
UniProt:
A0A8I5ZYJ7
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All DBs
Position
5:complement(128003907..128025518)
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AA seq
613 aa
AA seq
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MAGSRGLPLLLLLPQLFLGPVLPVRAPVFGRSDTHTLSPEENEFVEEEEQPVLVLSSEEP
EPGRATIDCPRDCACSQEGVVDCGGIDLREFPGDLPEHTNHLSLQNNQLEKIYPEELARL
QRLETLNLQNNRLTSRGLPEEAFEHLTSLNYLYLANNKLTLAPRFLPNALISVDFAANYL
TKIYGLTFGQKPNLRSVYLHNNKLADAGLPDNMFNGSSNVEILILSSNFLRHVPKHLPPA
LYKLHLKNNKLEKIPPGAFSELSNLRELYLQNNYLTDEGLDNETFWKLSSLEYLDLSSNN
LSRVPAGLPRSLVLLHLEKNVIQSVDADVLTPIRNLEYLLLHSNQLQAKGIHPLAFQGLK
RLHTVHLYNNALERVPSGLPRRVRTLMILHNQITGIGREDFATTYFLEELNLSYNRITSP
QMHRDAFRKLRLLRSLDLSGNRLQTLPPGLPKNVHVLKVKRNELAALARGALAGMAKLRE
LYLTGNRLRSRALGPRAWVDLAGLQLLDIAGNQLTEIPEGLPPSLEYLYLQNNKISAVPA
NAFDSTPNLKGIFLRFNKLAVGSVVESAFRRLKHLQVLDIEGNFEFGNVSKDRGHKDEEE
EEEEEEDEEEETR
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggccggcagcaggggcttgccactcctgctgctgttgcctcagctgttcctgggtccc
gtgctgcctgtgagggcacctgtgtttggccgaagtgacacccacaccctaagccctgag
gagaatgaatttgtggaggaagaggagcagccagtgctagtactgagctctgaggagcca
gagcctggccgggccaccatcgactgtccccgagattgtgcctgctcccaggaaggcgtc
gtggactgtggtggcatcgacctgcgggagtttccgggagacctgcccgagcacaccaat
catctctctttgcagaacaaccagctggagaagatctaccccgaggaactggctcggctg
cagcggctggagacgcttaacctacagaacaatcgcctgacatcccgagggctcccagag
gaggcatttgagcatcttactagcctcaattacctgtacctggccaacaacaagctgaca
ttggcaccccgattcctgccaaacgccctgatcagtgtggacttcgctgccaattatctc
actaagatctatggactcacctttggccaaaagccaaatctgaggtccgtgtacctgcat
aacaacaagctagcagatgccgggctgccagacaacatgttcaacggctccagcaatgtc
gagatcctcatcctgtccagcaacttcctgcgccatgtgcccaagcacctgccacctgct
ctgtacaagctccacctcaagaacaataagctggagaagatcccccctggggccttcagt
gagctgagtaacctgcgggagctgtacctgcaaaacaattacctgaccgacgagggcctg
gacaacgagaccttttggaagctgtccagcctggagtacctggacttgtccagcaacaac
ctgtcgagggtcccagcgggtcttccgcgcagcctagtcctgctgcacctggagaaaaat
gtcatccagagtgtagacgctgatgtgctgacacccatccgcaacctggaatacctgctg
ctacacagcaaccagctgcaggccaagggcatccacccgctggccttccagggcctcaag
aggctccacacggtgcatctatacaacaacgcactggaacgtgtgcccagcggcctgccc
cgccgagttcgcaccctcatgatcctgcacaaccagattacaggcataggccgtgaggac
tttgccaccacctacttcctggaagagctcaacctcagctacaaccgcatcaccagccca
cagatgcaccgagatgccttccgcaagctacgcctgctgcgttcacttgacttgtctggc
aaccgcctgcaaacactgcctccgggcctgcctaaaaatgtacacgtgctcaaggtcaag
cgtaatgagctggctgctctggcgcgtggggcactagctggcatggccaagcttcgggaa
ctctacctcacaggcaaccgactgcgaagccgggccctgggaccccgtgcctgggtggac
cttgctggtctgcagttgctggacattgctgggaatcagctcacagagatcccggagggg
ctccccccatcgctggagtatctgtacctgcagaataacaagattagcgctgttcctgcc
aacgcctttgactctactcccaacctcaaggggatctttctcaggttcaacaagctggct
gtgggctccgtagtagaaagcgccttccggaggctgaaacacctgcaggtcttggacatt
gaaggcaactttgagtttggtaacgtttccaaggaccgaggccacaaagatgaggaagag
gaagaagaggaggaggaggacgaggaagaggaaacgagatag
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