Rattus norvegicus (rat): 102554393
Help
Entry
102554393 CDS
T01003
Symbol
Adamts13
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 13 isoform X1
KO
K08627
a disintegrin and metalloproteinase with thrombospondin motifs 13 [EC:
3.4.24.87
]
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04611
Platelet activation
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
102554393 (Adamts13)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rno01002
]
102554393 (Adamts13)
Enzymes [BR:
rno01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.87 ADAMTS13 endopeptidase
102554393 (Adamts13)
Peptidases and inhibitors [BR:
rno01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
102554393 (Adamts13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADAMTS_CR_3
TSP1_ADAMTS
ADAMTS_spacer1
TSP_1
ADAMTS_CR_2
Reprolysin
Reprolysin_3
Reprolysin_5
TSP1_spondin
Reprolysin_4
Adt-1
Peptidase_M10
Reprolysin_2
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
102554393
NCBI-ProteinID:
XP_006233941
RGD:
1311594
Ensembl:
ENSRNOG00000005780
UniProt:
D4A0T9
LinkDB
All DBs
Position
3:30697354..30736539
Genome browser
AA seq
1482 aa
AA seq
DB search
MDEKFPGGTVGSQATWDGTCRDREPLTSLSSCRPGVSSQNESQSPGLPSGHRLPVLRMSQ
LCLWLPCQPFLAASIRGILTGAIFILGCWGLSDFQKSFLQDLEPKDLSSSFSRHTAPLTG
HPSSHLQRLRQRRTSEDILHLELLVAVGPDVYQAHQEDTERYVLTNLNIGSELLRNPSLG
AQLQVHLVKLIILSDSENTPNITTNITSSLMSVCEWSQTINPHDDRDPSHADLIIYITRF
DLELPDGNQQVRGVTQQGGACSPSWSCLITEDTGFDLGVTIAHEIGHSFGLDHDGAPGSG
STCEARGHVMASDGAVPAGGALEWSTCSQRQLQHLLSTGQMHCLWDPPGLQSGLTWHQLV
AQPGLFYSADDQCRVAFGAGAVACTFSREGLDVCQALSCHTDPLDQSSCSRLLVPLLDGT
ECGVEKWCSKARCRSLAELAPVAVVHGHWSSWGPHSPCSRSCGGGVITRRRWCNNPRPAF
GGRACVGEDLQAKMCNTQACEKTQLEFMSEQCAQTDRHPLQLSQGSASFYHWDAAVQYSQ
GDTLCRHMCWAVGESFIVSRGDSFLDGTRCVPNGPREDGTVSLCLLGSCRTFGCDGKMDS
QQVWDACQVCGGDNSTCTSQNGSFTAGRAREYVTFLIVTPNMTSAHVINHRPLFTHLAVR
IQDHYIVSGKSSMSPNVTYPSLLEDYRVEYRVTLTEDQLPRLEEIHIRGPVRDDIEIQVY
RRYGGEYGGLTHPDITFTYFQRKQQAAWVWAAKRGPCSVSCGAGLRWVTYSCQDQAQNKW
VRNAQCQGSPQPPAWQEPCVSAPCPPHWVADDFGPCSVSCGGGLRERSLRCVEAHNGFLK
TLPPAPCRAVAQQPAGEVENCNSQPCPTGWEVSDPSPCVSSACEPGLESGSGTCVPRVGD
SEKPAMAGPCRPDDMSPVPEPCVRTTCSPGSGPVDTMSLGEEASSPVGSGKPSSQAEHVW
TPLVGLCSISCGKGLKELYFLCMDSVLKMPVQEELCGLASKPPSRWEVCRARPCPARWET
RVLAPCPVTCGGGRVPLAIHCVQLDHGRPVSVPHSKCWPAPRPGSFEDCSPEPCPARWKV
LPLGPCSASCGLGTATQMVACVQLDQGHDNEVDETFCKALVRPPASVPCLIADCAYRWHI
STWTECSVSCGDGIQRRHGTCLGPQAQVPVPANFCQHLPKPVTVRGCWAGPCAGQKISSS
LPHKEATLPSQTLAAVTAASLQWSQPQAQAHSLFPDSQSLGLQETLEEPGACGRQYLEPT
GTIDMRGQGQLDCVVAIGRPLGEVVTLQILESSLKCRAGELLLLWGKFTWRKMCWKMSGR
TFSTKANTVVVRQHRVLPGGGVLLLYRSQPAPGTFYKECDRQLFGPRGEITSPSLSPDGR
KAGTCRVFVSVAPQARIAIRALASDMGTASEGTSANYVSIRDIHGLKTTTFWGQQVLYWE
SEGSEAELEFSHGFLEAHASFQGQYWTIPPRTPEQVNSVALS
NT seq
4449 nt
NT seq
+upstream
nt +downstream
nt
atggatgagaaattcccaggaggtacagtgggaagccaggcaacttgggacggtacttgc
agagatagagaaccacttacctctctctccagctgcaggccaggcgtttcgtctcaaaac
gaatcccagtcaccagggctcccgtccggccatcggctgcctgttctaaggatgagccag
ctttgcttatggttgccgtgccagccttttcttgctgccagtatcagaggaatcctcacg
ggcgccatcttcattctgggctgctgggggctctctgatttccagaagagttttcttcaa
gatctggagcccaaggacttatcttcctccttcagccgccatactgctccactcacaggc
catccttcctctcacctccagagactgagacagaggaggacttcggaggacattctgcac
ctagaactcctggtagctgtgggccccgatgtttaccaggctcaccaggaggacacagag
cgctacgtgctcaccaacctcaatatcgggtcagaactgttgagaaacccgtccctaggg
gctcagctccaagtgcacctggtgaagctgatcattctctcggactcagagaatactccg
aatatcacgaccaacatcacctcatccttgatgagtgtctgcgagtggagccagacgatc
aatccccatgatgacagggacccaagtcatgctgacctgatcatctatataaccaggttt
gacctggagctgccggatggtaaccagcaggttcggggagtcacccaacagggtggtgcc
tgctctccttcctggagttgccttatcactgaggacactggcttcgatctgggggtcacc
attgcccacgagattggacacagctttgggctggaccatgatggtgctccaggcagtggc
agcacctgcgaggcccgtggccatgtgatggcatctgacggcgcagtgcctgctggaggg
gccctggagtggtccacctgcagccaaaggcagctgcagcacctgctcagcacagggcaa
atgcactgcctctgggacccgcccgggctgcagtcaggactcacatggcaccagctggtg
gcacagcctggcctcttctacagtgcagatgaccagtgccgtgtggctttcggcgccggg
gctgtcgcctgcaccttctccagggagggtctggatgtatgccaggctctgtcctgtcac
acagaccccctggaccaaagcagctgcagccgcctccttgttcctctcctggacgggaca
gaatgtggtgtagagaagtggtgctctaaggctcgctgtcgctccctagctgagctggct
cctgtggctgtggtacatggacactggtctagctggggcccccacagtccttgctctcga
tcctgtggaggaggtgtgatcaccaggagacggtggtgcaacaaccccaggcctgcattt
gggggacgtgcatgtgtgggcgaggacctccaggctaagatgtgcaacacgcaggcttgt
gagaagactcagctggagttcatgtcagagcagtgtgcccagacagacagacatccactg
caactttcccaaggcagtgcctccttctaccactgggatgctgctgtgcagtatagtcaa
ggggatactctgtgcagacacatgtgctgggctgttggagaaagtttcattgtcagccgt
ggggacagtttcctcgatgggacccgttgtgtgccaaatggtcctcgggaggatgggacc
gtgagcctctgtttgttgggtagctgcaggacctttggctgtgatggcaagatggactcc
cagcaggtttgggatgcgtgccaggtgtgtggaggagacaacagcacctgcacttcccaa
aatggctctttcacagctgggagagccagagagtatgtcacgttcctgatagtcactccc
aacatgaccagcgcacacgtcatcaaccacaggcctctcttcacacacttggcggtgagg
atccaggaccactacattgtgtcagggaagagcagcatgtcgcctaacgtcacgtaccct
tcccttctggaggactaccgcgtggagtacagagtaactctcactgaggaccagctgccc
cgcttagaggagattcacatccggggacctgtccgggatgacattgagatccaggtgtac
agacgatatggaggagaatatgggggtcttacacacccagacatcacctttacctacttc
caacggaagcagcaggcagcctgggtatgggccgctaagcgtgggccctgctcagtgagc
tgtggggcagggctgcgctgggtgacctacagctgccaggatcaagctcaaaacaagtgg
gtgaggaacgcccagtgccaagggagcccgcagccacctgcatggcaggagccttgtgtc
tctgccccgtgccctccacactgggtagctgacgactttggcccatgcagcgtgtcttgt
ggcggaggccttcgggagcggtcactgcgctgtgtagaggcccacaatggcttcttaaag
acgttgccgccagccccatgcagagcagtagcccagcagccagcaggagaggtagaaaac
tgcaactcccagccctgccccactggatgggaggtgtcagaccctagcccttgcgtgtca
tctgcgtgtgaacccggtctggagtcagggagtgggacatgtgtgcccagggtgggtgac
tcagagaagccagcgatggcaggcccctgccgcccggatgacatgtcacctgtgccggag
ccctgcgttaggaccacatgttctccaggctcgggtccggtggacaccatgtctctggga
gaggaggcttcatccccagtgggcagtggcaagccaagctctcaggctgaacatgtgtgg
actcctctggtggggctgtgctccatttcttgtgggaaaggtctgaaggagctgtatttc
ctgtgcatggattctgtcctcaagatgcctgtccaggaagagctatgtggcttggccagt
aagcccccaagccggtgggaggtctgcagggctcgcccatgtcctgctcggtgggagact
cgagtcttggcaccgtgtccggtgacctgtggcggggggcgagtgccgctggccattcat
tgtgtgcagctggaccacgggcgccctgtgtctgtacctcactccaagtgctggccagca
cctaggccaggctccttcgaggactgcagccctgagccttgtcctgctagatggaaagtc
ctgccccttggcccgtgctcagccagctgtggccttggcactgccacacaaatggtggcc
tgcgtgcagcttgaccaaggccatgacaatgaggtggatgaaactttctgtaaggctctg
gtgcggccccccgccagtgttccctgcctcattgctgactgtgcataccggtggcacatc
agcacctggacagagtgctccgtctcctgtggggatggcatccagcgccggcatggcacc
tgcctcggaccccaggctcaagtgcctgtgccagccaacttctgccagcacctgcccaag
ccagtgactgtgagaggctgctgggctggaccctgtgcagggcagaagatctccagctcg
ctgcctcacaaggaagctactcttcccagccagaccctggctgcggttactgctgcctct
ctgcaatggtcccagccccaagcccaggcccacagccttttcccagactcccagtctctg
gggctccaggaaaccctggaagagcctggagcctgtggaaggcaatacctggagcccaca
ggaaccattgacatgcgaggtcaaggacagctagactgtgtggtagccatcgggagacct
ctaggtgaagtggtgaccctccaaatcctcgagagctccctcaagtgcagagcaggggag
ctgctgctgctctggggtaagttcacatggcggaagatgtgctggaagatgtctggcagg
actttcagcacaaaagccaacacggtggtggtgaggcagcatcgtgtgctgccgggaggt
ggagtgctgctactgtaccggagccaacctgccccagggaccttctacaaagaatgtgac
aggcagctctttggacctcggggtgaaatcacgagtccctcactgagcccagacgggagg
aaggcaggaacctgcagggtctttgtcagtgtggccccacaggcccgaattgccatccgt
gccctggccagtgacatgggcactgcttctgaggggaccagtgccaactatgtctcgatc
agggatatccacggtctgaagactacaacattttgggggcagcaggtgctctactgggag
tccgaaggcagtgaggctgaactggagtttagccatggcttcctggaggcgcatgccagt
ttccagggccagtattggaccatcccaccgaggacaccggaacaggtcaacagcgtggct
ctgtcctag
DBGET
integrated database retrieval system
