Rattus norvegicus (rat): 102554647
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Entry
102554647 CDS
T01003
Symbol
Pasd1
Name
(RefSeq) circadian clock protein PASD1 isoform X1
KO
K21753
circadian clock protein PASD1
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
102554647 (Pasd1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS
PAS_9
PAS_3
PAS_4
Motif
Other DBs
NCBI-GeneID:
102554647
NCBI-ProteinID:
XP_038956269
RGD:
7496877
Ensembl:
ENSRNOG00000061428
LinkDB
All DBs
Position
X:154662718..154684001
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AA seq
822 aa
AA seq
DB search
MERNTQQKMRRGASNTCQRPTHEDLRNLLKKLQKMMDRLGYGPSRERFRGRPARYQAAIA
STSSQRGMLRVRTNYEQNEVPVFNTYEEYHKMVLQSFENISIVMNTDGKLIFVSQNVSPL
LGHRPEDIMGKNLLNIVLDEQKDEVSEKIILNLPLANKVGSLIEFCCYIRKGNVCPSALD
RYRYRAMYQGRDTYEYVKFILYLQDSYDESFVFFGHYGPNSRNIWSSAPRLLWEQQYYLV
GNISVLRTPNESVQPVKVQTNVIVIESDDDNTIQPRRLIKRRRRSKMQRHAQSEVVNVEE
HPESGTEVEIVDVQPATQRMPFELVQVRTSSRSSVSTDVSAATSLSAAVRTSTSTSSTDV
TTTTPVSTPTSGLGYLMDPKNLLEPQDMEFEVAPEFLLNDSQEEQASTEQEECTEENVKK
PLEELKGSISEDHGIDKDSAHHNVSSDDDCCIIENVQEEKDPKIKEAVCQEQEHQKSPET
TSSRPTTPLQAVRPEAVVEPIVRTDLRVHGAEARRAYQFQRPLLGERFAQLCGPQVPTQV
YDLTISRSFDDEPPSYTDIEEEEREREQCEYELAQRIEMLRNLPYERPGQQQTGQGQGPR
VYRPREQVVTVIDDVGPHAMNFFRNDNSEHPRNGRRRHREDPAPPLLHHASRSCQELTAS
HQASAPSCQVSASSCQLPAASRQASAPSCQISAPSCQLSAASRQASAPSCQISAPSCQVS
AAACQASAPSCQISAPSCQVSAEACQASAPPCQISAPSCQVSAAACQASAPPCQASASQQ
ASTASSTMSHQASSDNRRDNMPHFLHDHSGYSRAEENANPHP
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atggagagaaatacacaacaaaaaatgaggagaggtgcctctaatacatgccagaggcca
acgcatgaagatctgcgcaatttgctgaagaaacttcagaaaatgatggatcgacttggg
tatggaccatctagagagagattcagaggacggcctgcaagatatcaggcagctattgca
tctacatcttctcaaagaggaatgttaagagtacgcacaaattatgaacaaaatgaggtt
cctgtttttaatacctatgaagaataccataagatggttctccagtcatttgaaaatatt
tcaattgtaatgaacacagatggaaaacttatttttgtatcccagaatgtgtcacctctt
cttggccaccgtccagaagatattatgggaaagaacctactgaatattgttcttgatgaa
caaaaggatgaagtgtctgagaagattattcttaatcttccattggcaaataaagtggga
agtctaatagaattttgctgttacataagaaaaggaaatgtatgtccgagtgccctggac
agatatcgttatagggccatgtaccaagggagagacacatatgagtatgtgaaattcatc
ttgtacctacaggattcttatgatgagtcatttgtattttttggacactatggtcctaat
agccgaaacatttggtcatctgctccaaggctgttatgggagcaacagtactaccttgtg
ggaaacatttccgttcttcgtacaccgaatgagtcagtacaacctgttaaggttcaaaca
aatgttatagttattgaatcggatgatgacaatactattcaaccccgcaggcttataaaa
cgacgccggaggagcaaaatgcaaagacatgcccagtctgaagttgtgaatgtggaggag
catcctgaatcaggcacagaagttgagattgtagatgttcaaccagccactcagcgaatg
ccatttgaattagttcaggtcaggacatcctctcgctcaagtgtaagcacagatgtaagt
gcagctacaagcttaagcgccgctgtgaggacaagcacaagcacttcatctacagatgtt
acaacaacaacaccagtatcaacccctacatccggactggggtatttgatggatccaaaa
aacttgctagagccccaggacatggaatttgaagtggctccagaattccttcttaatgac
agccaagaagaacaggcctctacagagcaagaagaatgcactgaagagaatgtgaagaaa
cccctggaagagttaaagggctccatttctgaggaccatggaattgataaagattctgca
catcacaatgtttcttcggatgatgattgctgtataatagaaaatgttcaagaggagaaa
gaccctaagatcaaagaagctgtgtgccaagaacaagaacatcaaaagtcacctgaaact
acctcatcacgtccaaccacaccattacaggcagtgcgcccagaggctgtggtggaaccc
atagtgcgcacagatttgcgggtacatggtgctgaggcaaggagagcatatcaattccag
cgtccacttttgggggaaaggtttgcccaactctgtggaccacaagtgccaacacaggtc
tatgatttgactataagcagatccttcgatgatgaaccaccttcttacacagatattgaa
gaggaggaaagggaacgagaacaatgtgaatatgagttggctcagcgtattgagatgctt
cgaaacttaccatatgaacggccggggcagcaacaaactgggcaaggacaaggacctcgt
gtatatcgtccacgagagcaggtggtgactgttattgatgacgtggggccacatgccatg
aatttttttagaaatgacaactctgagcatccacgaaatggcagacgtagacatcgggag
gatcctgctcctccacttctgcatcacgcatcaagatcatgccaagaattaacagcatca
catcaagcttctgcaccatcatgccaggtatctgcatcgtcatgtcaattacctgcagct
tcacgtcaagcatctgcaccatcatgccagatatctgcaccgtcatgtcaattatctgca
gcttcacgtcaagcatctgcaccatcatgccagatatctgcaccgtcatgtcaagtatct
gcagcagcatgtcaagcatctgcaccatcatgccagatatctgcaccgtcatgtcaagta
tctgcagaagcatgtcaagcatctgcaccaccgtgtcagatatctgcaccgtcatgtcaa
gtatctgcagcagcatgtcaagcatctgcaccaccgtgtcaagcatcggcatcacagcaa
gcatcaacagcatcatcaacaatgtcacatcaagcctcctctgacaaccgaagagacaac
atgccacactttctgcatgatcattctggttattctcgtgctgaagagaacgccaatcct
cacccatga
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