Rattus norvegicus (rat): 103693257
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Entry
103693257 CDS
T01003
Symbol
Ercc4l1
Name
(RefSeq) DNA repair endonuclease XPF
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03420
Nucleotide excision repair
rno03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
103693257 (Ercc4l1)
03460 Fanconi anemia pathway
103693257 (Ercc4l1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rno03032
]
103693257 (Ercc4l1)
03400 DNA repair and recombination proteins [BR:
rno03400
]
103693257 (Ercc4l1)
DNA replication proteins [BR:
rno03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
103693257 (Ercc4l1)
DNA repair and recombination proteins [BR:
rno03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
103693257 (Ercc4l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
DUF1706
ANKRD13_C
Motif
Other DBs
NCBI-GeneID:
103693257
NCBI-ProteinID:
XP_063126086
RGD:
1304845
Ensembl:
ENSRNOG00000065745
LinkDB
All DBs
Position
10:1462146..1500409
Genome browser
AA seq
881 aa
AA seq
DB search
MERGLPGERQSMAPLLEYERQQVLELLDSDGLVVCARGLGADRLLYLFLRLHCHPACLVL
VLNTQPAEEVRPRDGWTGGFGGHRSRDWCGRNVKLYGILVYRAHRIIESCQEAFILRLFR
QKNKLGFIKAFTDNAVAFDTGFCHVERVMRNLFMKKLYLWPRFHVAVNSFLEQHKPEVVE
IRVSMTLAMLAIQTAILDVLNACLKELKYHNLSLEVEDLSLENALGKPFDKTICHYLDPL
WHQLGAKTKSLVQDLKILRTLLQYLSQYDCVTFLNLLESLRATEKVFGQNSGWLFLDAST
SMFVNARARVYRVPDVKLSKKTKTSEKMAGTETKKELVLESNPKWEALTEVLKEIETENK
ESEALGGPGQVLICASDDRTCCQLRDYLTAGAEAFLLRLYRKTFEKDGKAEEVWVNFRKG
DGPKRTMKSDKRPKDAQNKERASTKRGALKRKKKRELTLTQVLGTAEEPPEEGAVEEDLH
KQTGSSPEVCGGEIQHESFDLNVSSDAAYGILKEPLTIIHPLLGCSDPYALTRVLHEVEP
RYVVLYDAELTFVRQLEIYRASRPGKPLRVYFFVYGGSTEEQRYLTALCKEKEAFEKLIR
EKASMVVPEEREGRDETNLDLARGTAAMDTSTDTRKAGGQERNGTQPSIVVDMREFRSEL
PSLIHRRGIDIEPVTLKVGDYILTPELCVERKSVSDLIGSLHSGRLYSQCLAMSRYYRRP
VLLIEFDPSKPFSLAPRGAFVQEMSSSDVSSKLTLLTLHFPRLRLLWCPSPHATAELFEE
LKQNKPQPDAATAMAITEDSETLPESDRYNPGPQDFVQKMPGVNAKNCRSLMNQVQNIAE
LATLSLERLTGILGHSGNAKQLHDFLHTAYADLVSKGRVRK
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atggagcggggtctgccgggcgaacgccagagtatggcgcctctgttggagtacgagagg
cagcaggtgctggaactgctcgacagcgacgggctggtggtgtgcgcccgcgggctcggc
gccgaccggttactctaccttttcctgcggcttcactgccaccctgcctgcctggtgctg
gtgctcaacacgcagcctgccgaggaggtgcgaccgagggatgggtggaccggagggttt
gggggacatcggagccgagattggtgcggcaggaacgtgaagctatacggcatcctcgtg
tacagagcacacaggatcattgagtcttgccaggaagccttcattctgcgcctcttccgc
cagaaaaacaaactcggcttcatcaaagctttcaccgacaacgctgttgcctttgacact
ggcttttgtcacgtggaaagagtgatgaggaaccttttcatgaagaagctctacctgtgg
ccaaggttccatgtagcagtcaactcattcttggaacaacacaagcctgaagtcgtagag
attcgcgtgtccatgactctggccatgcttgccatccagacagccatactggacgtctta
aacgcgtgtctgaaggaacttaagtaccacaacctgtcgctagaagtagaagacttgtcg
ttagaaaatgctctggggaagccattcgacaagacaatctgccattacttggaccctttg
tggcatcagcttggagccaagactaaatccttggtgcaggatttgaagatactaagaacg
ttactgcagtatctctctcagtacgactgtgttacttttctaaatcttctggaatctctg
agagcaacagagaaggtgtttggtcagaattcaggttggcttttcctggatgctagcacc
tccatgttcgtgaatgctcgtgcccgagtttaccgtgtcccagatgtcaaactgagcaaa
aagaccaaaacatcggagaagatggcaggtacggaaacaaaaaaagaactggtcctagaa
agcaatccaaagtgggaggcgctgactgaagtcctgaaagaaatcgaaacagaaaataag
gagagtgaagcccttggtggcccaggccaggtgctgatctgtgcgagcgatgaccgcaca
tgctgccagctcagagactacctgactgctggcgcagaagccttcctactgcggctctac
aggaaaaccttcgagaaggacggcaaagctgaagaagtatgggtaaattttagaaaggga
gatggcccaaagagaactatgaaatctgacaaaagacccaaagatgcccaaaacaaagag
cgtgcttccaccaaaaggggtgctctcaaaaggaagaagaagcgagagctgactctgacg
caagtgttggggactgctgaggagccgccagaggaaggggctgtggaggaagacctacac
aaacagaccggaagtagcccagaagtctgcgggggagagattcagcatgaatcatttgat
ttaaacgtgtcatctgatgcagcctatggcatactgaaagagcccctgaccatcatccat
ccgcttctgggatgcagcgacccctatgccctgacacgagtactgcacgaggtggagcct
agatacgtggttctgtatgatgcagagctcacttttgttcggcagctggagatctacagg
gccagcaggcctgggaaacctctgagggtttacttttttgtatatggaggctccacagaa
gagcagcgctacctgactgctctgtgcaaagaaaaggaagcgttcgaaaagctcataagg
gaaaaagctagcatggttgtccctgaagaacgggaaggcagagatgaaaccaacctggac
ctggcaagaggcacagcagccatggacacttccactgacactcggaaagctggtggccag
gagcggaacggcacacagcccagcatcgtggtggacatgcgtgagtttcggagcgagctc
ccatctctaatccatcggaggggcattgacatagagccagtgactctgaaagtgggtgat
tacatcctgacacctgagctgtgtgtggagcgcaaaagtgtgagcgacctcattggctcg
ctgcacagtggccgcctatacagccagtgcctagccatgtcccgctactaccggaggcct
gtgctactcatcgagtttgacccgagcaagcccttctccctggcaccacggggtgccttc
gtccaggagatgagcagcagtgatgtgagctctaagctcacactcctcaccttgcacttc
ccacgcctgcggctgctctggtgcccctcgccccatgccacagccgagctgtttgaggag
ctgaagcagaacaagccacaacctgatgcggccacagccatggccatcaccgaagactca
gagacgctacctgagtcagacaggtataaccctggcccccaagattttgtgcaaaagatg
cctggggtcaatgccaagaactgtcgctccctgatgaatcaagtgcagaacatcgcagag
ctggccaccctgtccctggagcgactcacgggtatcctggggcactcgggaaatgccaag
cagctgcatgacttcctgcacactgcctatgcagacttggtgtccaaaggcagagtgaga
aagtga
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