Rattus norvegicus (rat): 108348201
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Entry
108348201 CDS
T01003
Symbol
Pcdhb15
Name
(RefSeq) protocadherin beta-7
KO
K16494
protocadherin beta
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rno04515
]
108348201 (Pcdhb15)
Cell adhesion molecules [BR:
rno04515
]
Cadherins
Protocadherins
108348201 (Pcdhb15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
REJ
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
108348201
NCBI-ProteinID:
XP_001055818
RGD:
11368541
Ensembl:
ENSRNOG00000020054
UniProt:
F2Z3R8
A6J371
LinkDB
All DBs
Position
18:29454334..29457872
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AA seq
800 aa
AA seq
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MEGILGFILKVLERMESRLEQAVKKRQVLFLYVFLGASWASAEQLQYSVAEETERGTFLA
NLAKDLGLGLGELSAREARIVSDQNTRFLLLSPLTGELILNEKLDREELCGPTEPCVLTF
QLLLERPFQIYRAALHVKDINDNSPVFLDKEIHLKISESTTPGATFFLERAQDSDVGTNS
LSNYTISPNDYFHIHVNDGGEGTIFPELVLDKMLDREEIPEFTLTLTALDGGSPPRSGTA
LVRILVLDINDNSPQFVQSLYKVQSPEDTPVGSLVVAVSARDLDTGSNGQITYTFSYATE
RILQTFQINSTSGNLYLKRELNYEAIQTYSITIQARDGGGLSGKCTVVVEVMDVNDNPPE
FLLSSLNSPIPENSPEAVVAVFRIRDRDSGNNGKTMCSVAHDLPFVLKPSVENFYTLVTE
KPLDREAYTEYNITITVSDLGTPRLTTQHTITVQVSDINDNAPTFTQTSYTMFVRENNSP
ALHIGTISATDSDSGSNAHITYSLLPPHDPQLALDSLISINADNGQLFAIRALDFEDLQA
FEFHVGAEDQGSPALSSQALVRVVVLDDNDNAPFVLYPLQNASTPCTELLPRAAEPGYLV
TKVVAVDRDSGQNAWLSFQLLKATEPGLFSVWSHNGEVRTTRMLGERDVPKHKLLLVVKD
NGEPPRSASVTLHVLLVDGFSQPYLPLPEMAHDPAQEEDALTLYLVIALASVSSLFLVSV
LLFIGVRICRRARAASLGVCFVPEEHFPGHVVDVSGAGTLSHNYQYEVSLTGGSAITSEF
KFLNSIAPNYLTESTGREID
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atggaaggaattttgggttttattttgaaagtcttggaaagaatggagtccagattggag
caagctgtgaagaaaaggcaagtgctgtttctttatgtatttcttggagcgtcctgggct
agcgccgaacagcttcagtactctgtggcagaggaaactgagagaggcactttcttagcc
aatctagcaaaggatttggggttggggctgggggaactgtcagcccgggaagctagaatt
gtttcagaccagaacacacggtttttactgctcagtcctcttactggagagctaattctt
aatgagaagctggaccgagaggaactgtgtggccccacagagccctgtgtgctgactttc
caattgctgttggaaagaccatttcagatttatcgtgctgcattacatgtcaaagatata
aatgataattctccagtatttctagacaaagaaatacacttgaaaatatcagaaagtacc
acgccaggggcgacgtttttcttagagagggcacaggattccgatgtgggaacgaacagc
ctgagtaactacaccataagccccaatgattatttccacattcacgtgaatgatggcggg
gaggggactatctttcctgaactggtactggataaaatgctggaccgagaagaaatacca
gaattcactttaactctcacagccttggatggtggctctccacctagatctgggacagcc
ttggtgcgaatcttggtgttggacataaatgacaactcccctcaatttgtgcagtcactt
tacaaagttcagtcacctgaagacaccccggttggctccttggttgtcgctgtgtctgct
agggacttagacacaggaagtaatggtcaaataacctacacattttcttatgccactgaa
agaattctccaaacgtttcaaatcaattctacatctggcaatctttatcttaaacgcgaa
ctcaattacgaggcaattcaaacttattcgataactattcaggccagagatggtggtgga
ctttctgggaaatgtactgtggttgtagaggtaatggacgtaaatgataacccacctgag
tttctcttgtcgtcacttaatagcccaattcctgaaaattcaccagaggcggttgttgct
gtttttagaattagagacagagattcagggaacaatgggaaaaccatgtgctccgttgca
catgatctccctttcgtcctgaagccatctgtggagaatttctatactctggtaacagaa
aagcctttagatagagaagcctacactgaatacaacatcaccatcacagtctccgacctg
ggcacacccaggctcacaacccagcacaccataacagtgcaggtttctgacatcaacgac
aacgcccccacctttacccaaacctcctacaccatgtttgtcagagaaaacaacagcccc
gccctgcacataggcaccatcagcgccacagactcagactcaggctccaatgcccacatc
acctactcactgctgccgccccacgacccgcagctggccctcgactcgctcatctccatc
aatgctgacaacgggcagctgtttgctattagggcgctagactttgaggacctacaagcc
tttgagttccacgtgggcgcagaagaccaaggctctcccgcgctcagcagccaggctctg
gtgcgtgtagtggtgctggacgacaatgacaatgcgcccttcgtgctctacccactgcag
aacgcctctacaccctgcacagagctgttgcccagggcagcagagcctggatacctggtc
accaaggtggtggcagttgaccgagattctggccagaatgcctggctgtcgttccaattg
cttaaggctacggaacccgggttgtttagtgtgtggtcgcacaatggcgaggtgcgcacc
accaggatgctaggcgagcgcgatgtgcccaagcacaagctgctgctggtagtcaaggac
aatggagaacctccacgctctgccagtgtcaccctgcatgtgttgctggtggatggcttc
tctcagccctacctgcctctgccagagatggcgcacgaccctgcacaagaagaagatgcg
ctgacactctacctggtcattgccttggcgtctgtgtcttctctcttcctggtgtctgtg
ctgctgttcattggagtgagaatctgcaggagggccagggcggcctctctaggtgtctgc
tttgtgcctgaggaacactttcctggccacgtggtggatgtcagcggtgcaggaaccctg
tcccacaactaccagtatgaggtgtctcttactggagggtcagcgataaccagtgaattt
aagttcctaaattcaattgcccctaactatctaactgaaagcacagggagagaaatagat
taa
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