Rattus norvegicus (rat): 114244
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Entry
114244 CDS
T01003
Symbol
Hcn2
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2
KO
K04955
hyperpolarization activated cyclic nucleotide-gated potassium channel 2
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04024
cAMP signaling pathway
rno04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09132 Signal transduction
04024 cAMP signaling pathway
114244 (Hcn2)
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
114244 (Hcn2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rno04040
]
114244 (Hcn2)
Ion channels [BR:
rno04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
114244 (Hcn2)
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GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
114244
NCBI-ProteinID:
NP_446136
RGD:
620689
Ensembl:
ENSRNOG00000008831
UniProt:
Q9JKA9
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Position
7:complement(10620422..10639457)
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AA seq
863 aa
AA seq
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MDARGGGGRPGDSPGATPAPGPPPPPPPPAPPQPQPPPAPPPNPTTPSHPESADEPGPRS
RLCSRDSSCTPGAAKGGANGECGRGEPQCSPEGPARGPKVSFSCRGAASGPAAAEEAGSE
EAGPAGEPRGSQASFLQRQFGALLQPGVNKFSLRMFGSQKAVEREQERVKSAGAWIIHPY
SDFRFYWDFTMLLFMVGNLIIIPVGITFFKDETTAPWIVFNVVSDTFFLMDLVLNFRTGI
VIEDNTEIILDPEKIKKKYLRTWFVVDFVSSIPVDYIFLIVEKGIDSEVYKTARALRIVR
FTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVMRICNLISMMLLLCHWDGCLQFL
VPMLQDFPSDCWVSINNMVNHSWSELYSFALFKAMSHMLCIGYGRQAPESMTDIWLTMLS
MIVGATCYAMFIGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPADFRQKIHDYYEHR
YQGKMFDEDSILGELNGPLREEIVNFNCRKLVASMPLFANADPNFVTAMLTKLKFEVFQP
GDYIIREGTIGKKMYFIQHGVVSVLTKGNKEMKLSDGSYFGEICLLTRGRRTASVRADTY
CRLYSLSVDNFNEVLEEYPMMRRAFETVAIDRLDRIGKKNSILLHKVQHDLSSGVFNNQE
NAIIQEIVKYDREMVQQAELGQRVGLFPPPPPPQVTSAIATLQQAVAMSFCPQVARPLVG
PLALGSPRLVRRAPPGPLPPAASPGPPAASPPAAPSSPRAPRTSPYGVPGSPATRVGPAL
PARRLSRASRPLSASQPSLPHGAPAPSPAASARPASSSTPRLGPAPTTRTAAPSPDRRDS
ASPGAASGLDPLDSARSRLSSNL
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgcgcgggggcggcgggcggccgggcgatagtccgggcgcgacccctgcgccg
gggccgccgccaccgccgccgccgcccgcgccccctcagcctcagccaccacccgcgcca
cccccgaaccccacgaccccctcgcacccggagtcggcggacgagcccggcccgcgctcc
cggctctgcagccgcgacagctcctgcactcctggcgcggccaagggcggcgcgaatggc
gagtgcgggcgcggggagccgcagtgcagccccgagggccccgcgcgcggccccaaggtt
tcgttctcatgtcgcggggcggcctcggggcccgcggcggccgaggaggcgggcagcgag
gaggcgggcccggcgggtgagccgcgcggcagccaggccagcttcctgcagcgccaattc
ggggcgctcctgcagccgggcgtcaacaagttctccctgcggatgtttggcagccagaag
gccgtggagcgcgagcaggaacgcgtgaagtcggcgggggcctggatcatccacccctac
agcgacttcaggttctactgggacttcaccatgctgttgttcatggtgggaaatctcatc
atcatccctgtgggcatcactttcttcaaggacgagaccacggcgccctggatcgtcttc
aacgtggtctcggacactttcttcctcatggacttggtgctgaactttcgcaccggcatt
gttattgaggacaacacggagatcatcctggaccccgaaaagataaagaaaaagtacctg
cgtacgtggttcgtggtagacttcgtgtcatccatcccggtggactacatcttcctcatc
gtggagaagggaatcgactccgaggtctacaagacggcccgtgcactacgcatcgtgcgt
ttcaccaagatcctcagtctgctgcggttgctgcggctatcccggctcatccgatatatc
caccaatgggaggagattttccacatgacctacgacctggcaagcgcggtgatgcgcatc
tgtaacctgatcagcatgatgctgctgctctgccactgggacggctgcctgcagttcctg
gtgcccatgctgcaagacttccccagcgactgctgggtgtccatcaacaacatggtgaac
cactcgtggagcgaactctattcgttcgcgctcttcaaggccatgagccacatgctctgt
attggctacgggcggcaggctcccgagagcatgacggacatctggctcaccatgctcagc
atgatcgtgggcgccacctgctacgctatgttcattgggcacgccacggcgcttatccag
tccctggactcgtcacggcgccagtaccaggagaagtacaagcaagtggagcagtacatg
tccttccacaaactgccggctgacttccgccagaagatccacgattactatgaacaccgg
taccaggggaagatgtttgacgaggacagcatcctgggggaactcaacggcccactgcgt
gaggagattgtgaacttcaactgccggaagctggtggcttccatgccgttgtttgccaac
gcagaccccaacttcgtcaccgccatgctgacaaagctcaaatttgaggtcttccagcct
ggagactacatcatccgagaggggaccatcgggaagaagatgtacttcatccagcacggg
gtggtgagcgtgctcaccaagggcaacaaggagatgaagctgtcagatggctcctatttt
ggggagatctgcctgctcacgaggggccggcgcacagccagtgtgcgggctgacacctac
tgtcgcctctactcactgagcgtggacaacttcaacgaggtgctggaggagtaccccatg
atgcggcgtgcctttgagaccgtggccattgaccgcctggaccgcataggcaagaagaac
tccatcttgctacacaaggttcagcatgatctcagctcgggtgtgttcaacaaccaggag
aacgccatcatccaggagattgtcaaatatgaccgtgagatggtgcagcaggcagagctg
ggccagcgtgtggggctcttcccaccaccgccaccaccgcaggtcacgtcggccatcgcc
acgctgcagcaggccgtggccatgagcttctgcccgcaggtggcccgcccgctcgtgggg
cccctggcgctagggtccccacgcctcgtgcgccgcgcgcccccagggcctctgcctcct
gcagcctcaccagggccacccgcagcgagccccccggctgcaccctcgagccctcgggca
ccgcggacctcaccctacggtgtgcctggctctccggcaacgcgtgtggggcccgcattg
cccgcacgccgcctgagccgcgcctcgcgcccactgtccgcctcgcagccctcgctgccc
cacggcgcgcccgcacccagccccgcggcctctgcgcgcccggccagcagctccaccccg
cgtctgggacccgcacccaccacccggaccgcggcacccagtccggaccgcagggactca
gcctcgccgggcgctgccagtggcctcgacccactggactctgcgcgctcgcgcctctct
tccaacttgtga
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