Rattus norvegicus (rat): 114245
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Entry
114245 CDS
T01003
Symbol
Hcn3
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3
KO
K04956
hyperpolarization activated cyclic nucleotide-gated potassium channel 3
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
114245 (Hcn3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rno04040
]
114245 (Hcn3)
Ion channels [BR:
rno04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
114245 (Hcn3)
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Gene cluster
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Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
114245
NCBI-ProteinID:
NP_446137
RGD:
620691
Ensembl:
ENSRNOG00000020444
UniProt:
Q9JKA8
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Position
2:complement(176849635..176867726)
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AA seq
780 aa
AA seq
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MEEEARPAVGDGEAATPARETPPAAPAQARAASGGVPESAPEPKRRQLGTLLQPTVNKFS
LRVFGSHKAVEIEQERVKSAGAWIIHPYSDFRFYWDLIMLLLMVGNLIVLPVGITFFKEE
NSPPWIVFNVLSDTFFLLDLVLNFRTGIVVEEGAEILLAPRAIRTRYLRTWFLVDLISSI
PVDYIFLVVELEPRLDAEVYKTARALRIVRFTKILSLLRLLRLSRLIRYMHQWEEIFHMT
YDLASAVVRIFNLIGMMLLLCHWDGCLQFLVPMLQDFPSDCWVSMNRMVNHSWGRQYSHA
LFKAMSHMLCIGYGQQAPVGMPDVWLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQYQ
EKYKQVEQYMSFHKLPADTRQRIHEYYEHRYQGKMFDEESILGELSEPLREEIINFTCRG
LVAHMPLFAHADPSFVTAVLTKLRFEVFQPGDLVVREGSVGRKMYFIQHGLLSVLARGAR
DTRLTDGSYFGEICLLTRGRRTASVRADTYCRLYSLSVDHFNAVLEEFPMMRRAFETVAM
DRLRRIGKKNSILQRKRSEPSPGSSSGGVMEQHLVQHDRDMARGIRGLAPGTGARLSGKP
VLWEPLVHAPLQAAAVTSNVAIALTHQRGPLPLSPDSPATLLARSARRSAGSPASPLVPV
RAGPLLARGPWASTSRLPAPPARTLHASLSRTGRSQVSLLGPPPGGGGRRLGPRGRPLSA
SQPSLPQRATGDGSPRRKGSGSERLPPSGLLAKPPGTVQPSRSSVPEPVTPRGPQISANM
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggaggcgcggccggcggtgggggacggggaagcggcgactcctgcacgcgag
acgcctcctgcggctcccgcccaggcccgcgcggcctcaggtggggtgccagagtctgcg
cccgagccgaagaggcggcagctcgggacgctgctgcagccgaccgtcaacaagttctct
ctccgggtcttcggcagccacaaagcggtggaaatcgagcaggagagggtgaagtccgcc
ggggcctggatcatccacccctacagcgacttccggttttactgggacctgatcatgctg
ctgctgatggtggggaacctcatagtactgcccgtgggcatcactttcttcaaggaggag
aactccccaccctggatcgtcttcaatgtcctctcggacactttcttcctgctggatctg
gtgctcaacttccgaactggcatcgtggtggaggaaggtgcggagatcctgttggcgccc
agggctatccgcacgcgttacctgcgcacctggttcctggtggacctgatttcctccatc
cctgtggattacatcttcctagtggtagagctggagccacgactagacgctgaggtctac
aaaacggcacgggccctgcgcatcgttagattcaccaagatccttagcctgctgcggctg
ctccgcctctcccgcctcatccgatacatgcaccagtgggaggagatctttcacatgacc
tacgacctggccagtgcagtggttcgcatcttcaacctcattggaatgatgttgctgctg
tgtcactgggatggctgtctgcagttcctggtccctatgctgcaggacttcccttccgac
tgctgggtctccatgaaccgcatggtgaaccactcgtggggccgccagtactcccacgcc
ctgttcaaggccatgagtcacatgctgtgcattggctacgggcagcaggcaccagtaggc
atgcctgacgtctggctcaccatgctcagcatgattgtgggcgccacctgctatgccatg
ttcatcggccacgccaccgccctcatccagtccctggactcgtcccggcgccagtaccag
gagaagtacaagcaggtggagcagtacatgtccttccacaagctgccagccgacacacgg
cagcgcatccacgagtactacgagcatcggtaccagggcaagatgttcgatgaagagagc
atcctgggggagctgagcgagccgcttcgggaggagattattaacttcacctgccggggc
ctggtggcccacatgccgctgtttgctcatgctgaccccagtttcgtcaccgcagtactc
accaagctccgttttgaggtcttccaacctggggatctggtggtgcgtgagggctccgtg
ggcaggaagatgtacttcatccagcatgggctgctcagtgtgttggcacggggcgcccgg
gacactcgcctcactgacggatcctactttggggagatctgcctgctgactcgaggtcgg
agaacagccagtgtaagggctgacacctactgtcgcctctactcactcagcgtggaccac
ttcaatgcagtgcttgaggagttcccgatgatgcgcagggcttttgagactgtggccatg
gaccggcttcggcgcatcggcaaaaagaattcgatattgcagcggaaacgctctgagccg
agtccaggcagcagcagtggtggcgtcatggagcagcatttggtacaacacgacagagac
atggctcgtggtattcggggtctggctccgggcacaggagctcgcctcagtggaaagcca
gtgctgtgggaaccactggtacacgcacctctgcaggcagctgctgtgacctccaacgtg
gccatagccttgactcatcagcgaggccctctgcccctctcccctgattctccagccacc
ctcctggctcgatctgctagacgctcagcaggctccccagcctccccactggtgcctgtc
cgagcaggtcctctgctggcccggggaccctgggcgtccacttctcgcctgcctgctcca
cctgcccgaaccctccatgccagcctatcccggacagggcgttcccaggtgtctctgttg
ggccctcccccaggaggaggtggtcggaggctaggacctcggggccgcccactctctgcc
tctcaaccctctctgcctcagcgagccacgggggatggctctcctaggcgcaaaggctct
ggaagtgagcgtctgcccccctcggggctcctggccaagcctccagggactgtccagcca
tccaggtcatcagtgcctgagccagttacccccagaggtccccaaatttctgccaacatg
tga
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