Rattus norvegicus (rat): 114517
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Entry
114517 CDS
T01003
Symbol
Itga6
Name
(RefSeq) integrin alpha-6 precursor
KO
K06485
integrin alpha 6
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04151
PI3K-Akt signaling pathway
rno04382
Cornified envelope formation
rno04510
Focal adhesion
rno04512
ECM-receptor interaction
rno04514
Cell adhesion molecule (CAM) interaction
rno04518
Integrin signaling
rno04640
Hematopoietic cell lineage
rno04810
Regulation of actin cytoskeleton
rno04820
Cytoskeleton in muscle cells
rno05145
Toxoplasmosis
rno05165
Human papillomavirus infection
rno05200
Pathways in cancer
rno05222
Small cell lung cancer
rno05410
Hypertrophic cardiomyopathy
rno05412
Arrhythmogenic right ventricular cardiomyopathy
rno05414
Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
114517 (Itga6)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
114517 (Itga6)
04514 Cell adhesion molecule (CAM) interaction
114517 (Itga6)
04518 Integrin signaling
114517 (Itga6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
114517 (Itga6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
114517 (Itga6)
04810 Regulation of actin cytoskeleton
114517 (Itga6)
09150 Organismal Systems
09151 Immune system
04640 Hematopoietic cell lineage
114517 (Itga6)
09158 Development and regeneration
04382 Cornified envelope formation
114517 (Itga6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
114517 (Itga6)
09162 Cancer: specific types
05222 Small cell lung cancer
114517 (Itga6)
09172 Infectious disease: viral
05165 Human papillomavirus infection
114517 (Itga6)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
114517 (Itga6)
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
114517 (Itga6)
05412 Arrhythmogenic right ventricular cardiomyopathy
114517 (Itga6)
05414 Dilated cardiomyopathy
114517 (Itga6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rno04147
]
114517 (Itga6)
04515 Cell adhesion molecules [BR:
rno04515
]
114517 (Itga6)
04090 CD molecules [BR:
rno04090
]
114517 (Itga6)
Exosome [BR:
rno04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
114517 (Itga6)
Exosomal proteins of breast milk
114517 (Itga6)
Cell adhesion molecules [BR:
rno04515
]
Integrins
Integrin alpha subunits
114517 (Itga6)
CD molecules [BR:
rno04090
]
Proteins
114517 (Itga6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_1
Integrin_A_Ig_2
FG-GAP
FG-GAP_3
Integrin_alpha
PAG
Motif
Other DBs
NCBI-GeneID:
114517
NCBI-ProteinID:
NP_446177
RGD:
621633
Ensembl:
ENSRNOG00000001518
UniProt:
Q924W3
Q924W2
LinkDB
All DBs
Position
3:77012168..77097076
Genome browser
AA seq
1073 aa
AA seq
DB search
MAVAGQLCLLYLSAGLLARLSTAFNLDTREDNVIRKSGDPGSLFGFSLAMHWQLQPEDKR
LLLVGAPRAEALPLQKANRTGGLYSCDITSRGPCTRIVFDNDADPMSESKEDQWMGVTVQ
SQGPGGKVVTCAHRYEKRQHVNTKQESRDIFGRCYVLSQNLRIEDDMDGGDWSFCDGRLR
GHEKFGSCQQGVAATFTKDFHYIVFGAPGTYNWKGIVRVEQKNNTFFDMNIFEDGPYEVG
GETDHDESLVPVPANSYLGFSLDSGKGIVSKDDITFVSGAPRANHSGAVVLLKRDMKSAH
LLLEYIFDGEGLASSFGYDVAVVDLNADGWQDIVIGAPQYFDRDGEVGGAVYVYINQQGR
WSNVKPVRLNGTKDSMFGIAVKNIGDINQDGYPDIAVGAPYDDLGKVFIYHGSPTGIITK
PTQVLEGTTPFFGYSIAGNMDLDRNSYPDVAVGSLSDSVTIFRSRPVINILKTITVTPSR
IDLRQKSMCGSPSGICLKVKACFEYTAKPSGYNPPISILGILEAEKERRKSGLSSRVQFR
NQGSEPKYTQELTLNRQKQRACMEETLWLQENIRDKLRPIPITASVEIQEPSSRRRVNSL
PEVLPILNSNEAKTVQTDVHFLKEGCGDDNVCNSNLKLEYKFGTREGNQDKFSYLPIQKG
IPELVLKDQKDIALEITVTNGPSDPRNPRKDGDDAHEAKLIATFPDTLTYSAYRELRAFP
EKQLSCVANQNGSQADCELGNPFKRNSSVTFYLILSTTEVTFDTTDLDINLKLETTSNQD
NLAPITAKAKVVIELLLSVSGVAKPSQVYFGGTVVGEQAMKSEDEVGSLIEYEFRVINLG
KPLKNLGTATLNIQWPKEISNGKWLLYLMKVESKGLEQVVCEPHNEINFLKLKESHNSRK
KRELPEKQIDDSRKFSLFSERKYQTLNCSVNVRCVNIRCPLRGLDSKASLVLRSRLWNST
FLEEYSKLNYLDILVRASIDVTAAAQNIKLPHAGTQVRVTVFPSKTVAQYSGIAWWIILL
AVLAGILMLALLVFLLWKCGFFKRNKKDHYDATYHKAEIHTQPSDKERLTSDA
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcgccggccagttgtgcttgctctacctgtccgcagggcttctggcccggctg
agcacagctttcaacctggatacccgcgaggacaacgtgatccggaaatcgggggatccc
gggagcctcttcggcttctcgctcgccatgcactggcagttgcagccggaggacaagcgg
ctgttgcttgtgggggcacctcgggcagaagcacttcccctgcagaaggcgaacagaaca
gggggcctgtacagctgtgacatcacctcccggggaccttgcacacgaattgtatttgat
aatgatgctgatcctatgtcagaaagcaaggaagaccagtggatgggagtcactgtccag
agtcaaggtccagggggcaaagtggtgacgtgtgcgcatcgatacgagaaacggcagcac
gttaacacgaagcaggagtcccgggacatcttcggaaggtgttacgtcctgagtcagaat
ctcagaattgaagatgatatggatggaggagactggagtttctgtgatggccgattgagg
ggccatgaaaaatttggctcttgtcagcaaggagtagcggctactttcactaaagacttt
cattacattgtttttggagccccagggacttacaactggaaagggatcgttcgtgtagaa
caaaagaataacactttttttgacatgaacatctttgaagatgggccctatgaagttggt
ggagagactgatcatgacgaaagtctcgtgcccgttcctgctaacagttatctaggcttt
tctctggactcagggaagggtattgtttctaaagatgacatcacttttgtatctggtgct
ccaagagccaatcacagtggggctgtagttttgctaaaaagagacatgaagtcagcacat
cttctccttgagtatatatttgatggtgaaggcctggcttcttcgtttggctatgacgtg
gcggtggtggacctcaatgcagatgggtggcaagacatcgttatcggagcgccacagtac
tttgacagggatggcgaagtcgggggtgcggtgtacgtctacattaaccagcaaggcaga
tggagtaatgtgaagccagttcgtctaaatgggaccaaagactcgatgtttggaatcgca
gtgaaaaatatcggcgatattaatcaagatggctatccggatattgctgttggagctccc
tatgacgatctggggaaggtttttatctatcatggatccccgactggcataattaccaag
ccaacacaggttcttgagggtacaacgcctttcttcggctactcaatcgctgggaacatg
gacctggacaggaattcctaccctgacgttgctgtgggttccctctcagactcagtaact
attttcagatcccggccagtgattaacattctgaaaaccatcacagtgactcctagcaga
attgacctccgccagaaatccatgtgtgggtcacctagcgggatatgcctcaaggttaaa
gcctgttttgaatatactgcgaagccctccggttataaccctccaatatcaattttgggt
attcttgaagctgaaaaagaaagaagaaagtcagggttgtcgtcaagagttcagtttcga
aaccaaggttctgagccaaagtatactcaggagctgaccctgaacaggcagaagcagcgg
gcatgcatggaggagacgctctggctgcaggaaaacatcagagacaagctgcgccccatc
cccatcacggcttctgtggagatccaggagcccagctctcgacggcgggtgaattcactt
ccagaagttcttcccatcttgaattcaaatgaagccaaaacagtgcagacagatgtccac
ttcttaaaggaaggatgtggagacgacaatgtctgtaacagcaaccttaagctagagtat
aaatttggtacccgagaaggaaatcaagacaaattctcttaccttccaattcagaaaggc
atcccagaattagtcctaaaagatcagaaagatatagctctggaaataacggtgaccaac
ggcccttctgatccaaggaatccccggaaagatggtgacgatgcccacgaagccaaactc
atcgcaacgtttccagacaccctgacatattccgcctacagagagctgagggctttccct
gagaagcagctgagctgtgttgccaaccagaatggctcccaagctgactgtgagctcgga
aatcctttcaagagaaattccagtgttactttttatctgattttaagtaccaccgaggtc
acctttgacaccacagatctggatattaatctgaagttggaaacaacaagcaatcaggat
aatttggctccaattacagcgaaagcaaaagtggttattgaattgcttttatcggtctct
ggagtcgctaagccttcgcaggtgtattttggaggtacagttgttggtgagcaggccatg
aagtctgaagatgaagtaggaagtttaatagagtatgaattcagggtgattaacttgggt
aaacctcttaaaaacctcggcacggcaaccctgaatatccagtggcccaaggagattagc
aatggcaaatggttgctttatttgatgaaggtcgaatccaaaggtttggagcaggttgtc
tgtgagccacacaatgaaataaacttcctcaagctgaaggagtctcacaactcaagaaag
aagcgggaacttcctgaaaaacagatagacgacagcaggaagttttctctattttccgaa
agaaaataccagaccctcaactgcagcgtcaacgtgaggtgtgtgaacatcaggtgtcca
ctgcgagggctggacagcaaggcctctctcgttctacgctccaggctgtggaacagcacg
tttctagaggaatattccaaactgaactacttggacatcctcgtgagggcgtccatagat
gtgaccgccgccgctcagaatatcaagctccctcatgcgggcactcaggttcgagtgacg
gtgtttccctcaaagacggtagctcagtattcagggatagcgtggtggatcatcctcctg
gctgtgcttgccgggattttgatgctggctctattagtgtttttactgtggaagtgtggt
ttcttcaagagaaataagaaagatcattacgatgccacctaccacaaggctgagatccac
actcagccgtctgataaagagaggcttacttccgatgcatag
DBGET
integrated database retrieval system
