Rattus norvegicus (rat): 114589
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Entry
114589 CDS
T01003
Symbol
Cntn5
Name
(RefSeq) contactin-5 precursor
KO
K06761
contactin 3/4/5/6
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rno04515
]
114589 (Cntn5)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
rno00537
]
114589 (Cntn5)
Cell adhesion molecules [BR:
rno04515
]
Immunoglobulin superfamily
Contactins
114589 (Cntn5)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
rno00537
]
Others
114589 (Cntn5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
Ig_DSCAM-DSCAML_C
Ig_C17orf99
Ig_5
Ig_6
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
114589
NCBI-ProteinID:
NP_446198
RGD:
621302
Ensembl:
ENSRNOG00000007038
UniProt:
P97527
A6JN62
LinkDB
All DBs
Position
8:complement(15017424..16249418)
Genome browser
AA seq
1099 aa
AA seq
DB search
MASSWRLILFLSFTSCLSEYSEALSGLSTSYAALLRIKKSSTSSAFGSKSRPRYSSPSLG
TLSVSPPSWRGAAQQYHSPVNLYHSPDAFRQDESVDYGPVFVQEPDDIIFPTDSDEKKVA
LNCEVRGNPSPTYRWLRNGTEIDLESDYRYSMIDGTFIINNPSESRDSGLYQCLATNTFG
SILSREATLQFAYLGNFSGRTRSAVSVREGQGVVLMCSPPPHSPEIIYSWVFNEFPSFVA
EDSRRFISQETGNLYISKVQTSDVGSYICLVKNAVTNARVLSPPTPLTLRNDGVMGEYEP
KIEVHFPTTVTAAKGTTVKMECFALGNPVPTITWMKVNGYIPSKSRLRKSQAVLEIPNLQ
LDDAGIYECTAENSRGKNSFRGQLQIYTYPHWVQKLNDTQLDSGSPLQWECKATGKPRPT
YRWLKNGAPLLPQSRVDTANGVLAIHSVNQSDAGMYQCLAENKYGAIYASAELKILASPP
SFELNQVKKSIIVTKDREVLIECKPQGSPKPAISWRKGDKAVRGNKRIAILPDGSLRILN
ASKADEGKYICQGVNIFGSAEIIASVSVKEPTRIELTPKRTELTVGESIVLNCKAMHDSS
LDVTFYWTLKGQPIDFEKEGGHFESIRAQASSADLMIRNILLMHAGRYGCRVQTTADSVS
DEAELLVRGPPGPPGVVIVEEITESTATLSWSPATDNHSPISSYNLQARSPFSLGWQTVK
TVPEVITGDMESAMAVDLNPWVEYEFRVVATNPIGTGDPSIPSRMIRTNEAVPKTAPSNV
SGGSGRRHELVIAWEPVSEEFQNGEGFGYIVAFRPNGTRGWKEKMVTSSDASKFIYRDES
VPPLTPFEVKVGVYNNKGDGPFSQIVVICSAEGEPTAAPTDVTATSVSVSEIFVVWKHVK
ESLGRPQGFEIGYWKDTEPEDSAETVRTRGNESFVMLTGLEGDTLYHLTVRAYNGAGYGP
PSREVSATTKRHPPSEPPGNLRWEQQGSQVSLGWEPVRPLANESEVMGYKVFYRQEGHSK
GQVIETQKPQAVVPLPEAGVYIIEVRAYSEGGDGTASSQIRVPSYAGGKITSAQSTLHSL
SKWSSVTLLLALMLPSSSW
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atggcttcctcttggagactaatcctgttcctgtctttcacaagttgtctttcagaatac
tctgaagctctctctggcctttctacttcatatgctgctttgctaagaattaagaagagt
tcaacctcatctgccttcggttccaagtccagaccacgatacagcagtccttcattaggc
accctcagtgtttctccaccgagctggcgaggggcagctcagcagtaccactccccggtt
aacctttaccactccccagatgccttcagacaggatgaaagtgtggattatgggccagta
tttgtgcaagagcctgatgatattatttttccaactgattctgatgaaaagaaggtagcc
ctgaattgtgaagttcgtggcaacccatctcctacttacagatggcttcggaatggaaca
gaaattgatcttgagagtgactaccgctacagtatgatagacggcaccttcatcatcaac
aatccaagtgaaagcagggattcagggctctaccagtgtttagccaccaacacgtttgga
agtattctcagtcgagaagccacacttcagtttgcttatctggggaattttagtggccgg
acaagaagtgcagtctcagtgcgggaaggccagggggttgttctgatgtgctctccaccg
cctcattctccagagatcatctatagctgggtcttcaatgagttcccttccttcgtggca
gaggacagccggcggttcatatcccaagagacaggcaacctctatatttctaaagtgcaa
acatcagatgttggcagctacatttgtctggtgaaaaatgctgtaacgaatgctcgcgtg
ctcagccctccaaccccgctcacgcttcgaaatgatggtgtaatgggagaatacgagcca
aaaattgaggtccattttcccaccacggtcacagctgctaagggaacgactgtgaagatg
gaatgctttgcacttggcaaccctgttccaacgatcacttggatgaaggttaacggttac
attcccagtaagtccagactgcgaaaatcccaggcggtcctggagatccccaacctgcag
ctggatgacgccggaatatatgaatgcacagctgaaaactcccgagggaaaaactccttt
cgtggacagctccaaatatacacgtacccacactgggtacagaaactgaatgacacccag
ctggacagtgggagtcctctgcagtgggaatgcaaggctaccggaaagcccaggcccaca
taccgctggctgaagaatggagcacccctcctgccacagagcagagtggacacagctaat
ggagtattggcgatccatagtgtaaatcaatcagatgctgggatgtatcagtgtttggct
gagaataaatatggagctatttatgcgagcgccgagctgaagattttagcctcaccaccc
tcttttgaactgaatcaagtgaagaaatcaataattgtcacgaaagaccgggaagtgctc
atagaatgcaaaccccagggctctccaaagccagccatctcctggaggaagggagacaag
gcagtgagggggaacaagagaatagctattcttccagacggaagcctgcggatcctcaat
gcttctaaagcggatgaggggaagtacatttgccaaggggtgaacatcttcggttccgcg
gagatcatagcttctgtgtctgtcaaagaacccacaaggatagagcttactcctaaaaga
acagagttaactgttggagagagcattgtccttaactgcaaagccatgcacgactccagt
ttggatgtcactttctactggacactaaaaggacaacctattgattttgagaaagaaggc
ggacattttgaaagcatcagggctcaagcatcctctgcagatttaatgatcaggaacatc
cttctgatgcatgctgggagatatggctgcagggtacagaccacagcagacagtgtgtca
gatgaggcagaacttcttgttaggggtcccccagggccacctggagtggtcatagtggag
gagatcacagaaagcacagccactctctcatggagtccagcaactgacaaccacagcccc
atctcttcctacaaccttcaggctcgcagccccttctccctgggctggcaaacagtgaag
acagtccctgaagtcatcacaggagacatggagtcagcgatggctgtggacctaaacccc
tgggtagaatatgaattccgagtggtggccaccaatccaattgggacaggagatccaagc
attccatctcgaatgatccgcacaaacgaggcagttcctaagacggcacccagcaacgtg
agtggaggaagtggaagaaggcacgagttggtcattgcctgggagccagtatcagaagag
tttcagaatggggaaggcttcggctacatagtggcattcagaccgaatggaacacgtggc
tggaaggagaaaatggttacttcttcggatgcttccaagttcatttaccgagacgaaagt
gtccctcctctcacaccctttgaagtcaaagttggtgtctataataataaaggtgatggg
cctttcagccagattgtagtcatctgctcggctgagggagaacccactgctgctcccact
gatgtcacagcgaccagtgtgtcggtgtcagagatttttgttgtatggaaacatgttaaa
gagagtctcggaagaccacaggggtttgagattggttactggaaagataccgagccagaa
gactctgcagaaacagtcagaaccagagggaatgagtcattcgtcatgttgacgggattg
gaaggcgacacactctatcacctcacagtcagggcttacaatggagccgggtatgggcca
cccagcagggaagtgagcgccaccaccaagaggcacccccctagcgaaccacctggcaac
ctccgttgggaacagcagggttcccaggtttccctaggctgggagcctgtcagacctcta
gccaacgagtctgaagtcatgggttacaaggttttttataggcaagagggtcacagcaaa
ggtcaagttattgagacacagaaacctcaggctgttgtgcctctccctgaggctggagtc
tacattattgaagttcgagcgtacagtgaaggaggagatggaacagcgagctcccaaatc
agggtaccttcatatgcaggtgggaaaatcacaagcgctcagtccaccctgcactctctc
tccaagtggtcctcagtaacactgctcttggctttgatgcttccttccagttcctggtga
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integrated database retrieval system
