Rattus norvegicus (rat): 114638
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Entry
114638 CDS
T01003
Symbol
Hps1
Name
(RefSeq) BLOC-3 complex member HPS1
KO
K20193
Hermansky-Pudlak syndrome 1 protein
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rno04131
]
114638 (Hps1)
Membrane trafficking [BR:
rno04131
]
Endosome - Lysosome transport
Others
BLOC-3 complex
114638 (Hps1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fuz_longin_1
Fuz_longin_3
Fuz_longin_2
Motif
Other DBs
NCBI-GeneID:
114638
NCBI-ProteinID:
NP_414541
RGD:
69193
Ensembl:
ENSRNOG00000045838
Vega:
OTTRNOG00000001731
UniProt:
A6JHC0
Q99MK7
LinkDB
All DBs
Position
1:complement(251500427..251526529)
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AA seq
706 aa
AA seq
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MRCVLVATEGAEVLFYWTDEEFEENLRQKFRQSENEEEELPVLEDQLNTLLAPVIISYMT
MLEKLSDTYTCFSTENGDHLYVLHLFGECLFIAINGDHSENEGDLRRKLCVLKYLFEVHF
GLVTVDSQLIRKELRPPDLEQRAQVWKHFQRLLGTYSRLREQEQSFAVEAVERLIHAQLC
ELSIETLERHVVQAVNSSPERGGEEVLHAFLLVHCKLLAFYSSHVASALRPADLLALILL
VQDLQPSQGTTEEEEDGNDGPQPFPHRRPMSSQNIPVQQSRSQSTSVPTRSSKETDTDSI
SLPEEYFTPAPSPGEQSSGSLVWLDGGTPPSDVLQMAEDTLNGLAPHSPELPRPRRIFLD
ANIKENYCPLVPHTMYCLPLWPGISMVLLTKSPSTPLALILYQLLDGFSLLEKKLKEGQE
AGSALRSQPFVGDLRQKMDKFIKNRVGQEIQNAWLEFKSKAFSRSEPGSSWELLQICGKL
KRQLCAIYRLNFLATAPSRGGPHLPQHLQSQAQKLMKERLQDWKDFLLVKSWRNVTIVSY
LEDFPGLVHFIYVDRTTGQMVAPSLSPSEKMSSELGKGPLAAFVKAKVWALIRLARRYLQ
KGCTTLLFQEGDFRCSYFLWFENDMGYKLQMIEVPVLSDDSVPIGVLGGDYYRKLLRYYS
KSRPSEPVRCYELLTLHLSVIPTDLLVQQANQLARRLGEASRVTLP
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgaggtgtgtgttggtggccactgagggcgcagaggtcctcttctactggacggatgag
gaatttgaggagaacctccggcagaagttcaggcagtcagagaatgaggaagaggagctc
cctgtgctggaggaccaactcaacaccctcctggctccggtcatcatctcttacatgacg
atgctggagaagctctcggacacgtacacctgcttctcaacagaaaacggcgaccacctg
tatgtcctgcatctgtttggagagtgcctgttcatcgccatcaatggagaccacagtgag
aacgaaggggacctgcggaggaagctgtgcgtgctcaagtacctgtttgaggtgcacttc
gggctggtgactgtggacagccagctcatccggaaggagcttcgtccccctgacctggaa
cagcgtgcccaggtgtggaagcactttcaaagactgctggggacctacagtcgcctgcgt
gaacaggagcagagctttgctgtggaggctgtggagcggctcattcacgcccagctctgc
gaactgagcatcgagaccctggagcgacatgtggttcaagcggtcaactccagccctgag
cggggcggtgaggaggtcctgcatgccttcctgcttgtgcactgtaagctgctggctttc
tactccagccatgttgcgagcgccctgcgccctgcagatctcctggccctcatccttctg
gttcaggacctccagccctcccaaggcaccaccgaggaggaggaggatggcaatgacggc
cctcagcctttcccccataggagacccatgagcagccagaacatcccagtccagcagtcg
aggagccagagcacctcagttcccaccaggagttccaaggagacagacacagacagcatc
tccctccctgaggagtacttcacccctgctccttccccgggcgagcagagttcaggtagc
ctcgtctggctggatggtggcaccccgcccagcgacgtccttcagatggctgaggacacc
ctcaacgggctggcgccacactccccagagcttcccaggcccagaaggatcttcctggat
gccaacataaaagaaaactactgtcccttggtgccccacaccatgtactgcctgcccctg
tggccgggcatcagcatggtgctgctgaccaagagtcccagcaccccactggccctgatc
ctgtaccaactgctagatggcttctcgctactggagaaaaagctgaaggaaggtcaggag
gccggaagtgccctgcggtcccagccctttgttggagacctgcgccagaagatggacaag
tttatcaagaatcgagttgggcaggagattcagaacgcctggctggagttcaaaagcaaa
gccttctctagaagtgaaccaggatcgtcctgggagctgcttcagatctgtggaaagctg
aagcgacagctgtgtgccatctaccggctaaacttcctggccactgcacccagcagggga
ggcccacacctgccccagcacctgcaaagccaagcccagaaactcatgaaggagcgactt
caggactggaaggacttcctgttggtgaagagctggagaaatgtcaccatagtgtcctac
ctggaggatttcccaggcctggtccacttcatctatgtggaccgtacgacagggcagatg
gtggctccttctctcagccccagtgaaaaaatgtcttctgagttgggcaaggggcccctg
gctgccttcgtcaaagccaaggtctgggctctgatccgactggcacgcaggtacctgcag
aagggctgcaccacgctgctattccaggaaggggacttccgctgctcctacttcctgtgg
ttcgagaacgacatgggatacaaactgcagatgatcgaggtgcctgtcctctccgatgac
tcagtccccattggcgtgctgggaggtgactactacaggaagctccttcgttactacagc
aagagccgcccctcggagccggtcaggtgctatgagctgctgacactgcacctgtccgtc
atccccactgacctgctggtgcagcaggccaaccagctcgcccggcgcctgggggaggcc
tcccgggtgaccctgccctag
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