KEGG   Rattus norvegicus (rat): 116490
Entry
116490            CDS       T01003                                 
Symbol
Snai1
Name
(RefSeq) zinc finger protein SNAI1
  KO
K05707  snail 1
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04520  Adherens junction
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    116490 (Snai1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    116490 (Snai1)
Transcription factors [BR:rno03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 Snail
    116490 (Snai1)
SSDB
Motif
Pfam: zf-C2H2 zf-C2H2_4 zf-H2C2_2 zf-C2H2_jaz zf-C2H2_6 C2CH-3rd_BIRD-IDD zf-met zf-C2HE Zf-C2H2_ZNF451_1st zf-Di19 Zn_ribbon_Elf1 Zf-C2H2_ZNF451_6th zf-C2H2_15 zf-BED zf-C2H2_ZNF462_1st Zn_ribbon_8
Other DBs
NCBI-GeneID: 116490
NCBI-ProteinID: NP_446257
RGD: 620758
UniProt: Q6AY35
LinkDB
Position
3:176667476..176671965
AA seq 264 aa
MPRSFLVRKPSDPRRKPNYSELQDACVEFTFQQPYDQAHLLAAIPPPEVLNPAASLPTLI
WDSLLVPQVQPVAWATLPLRESPRAAELTSLSDEDSGKSSQPPSPPSPAPSSFSSTSASS
LEAEAFIAFPGLGQLPKQLARLSVAKDPQSRKAFNCKYCNKEYLSLGALKMHIRSHTLPC
VCTTCGKAFSRPWLLQGHVRTHTGEKPFSCSHCNRAFADRSNLRAHLQTHSDVKRYQCQA
CARTFSRMSLLHKHQESGCSGGPR
NT seq 795 nt   +upstreamnt  +downstreamnt
atgccgcgctccttcctggtcaggaagccgtccgacccccgccggaagcccaactatagc
gagctgcaggacgcgtgtgtggagttcaccttccagcagccctacgaccaggcccacctg
ctggcggccatccctccgcccgaggtcctcaaccccgccgcttcgctgcccaccctcatc
tgggactctctcctggtgccccaagtacagccggtggcctgggccaccctcccgctgcgg
gagagccccagggccgcagagctgacttctctgtccgatgaggacagtggcaaaagctcc
cagccgcccagcccgccctcgccggcgccgtcgtccttctcttccacctcggcctcatcc
ctggaagccgaggccttcattgccttcccgggcttgggccaacttcccaagcagctggcc
aggctctcggtggccaaggacccccagtcccggaaggccttcaactgcaaatattgtaat
aaggagtacctcagcctgggcgctctgaagatgcacatccgaagccacacgctgccttgc
gtctgcacgacctgcggaaaggccttctccaggccctggctgctccagggccacgtccgc
acccacactggtgagaagcctttctcctgctcccactgcaaccgtgcctttgccgaccgc
tccaacctacgtgcccacctccagacccactcggatgtgaagagataccagtgtcaggcc
tgcgcccgaaccttctcccgaatgtccttgctccacaaacaccaagagtctggctgctcc
ggaggccctcgctga

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