Rattus norvegicus (rat): 116665
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Entry
116665 CDS
T01003
Symbol
Rere
Name
(RefSeq) arginine-glutamic acid dipeptide repeats protein
KO
K05628
arginine-glutamic acid dipeptide repeats protein
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rno03000
]
116665 (Rere)
Transcription factors [BR:
rno03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
116665 (Rere)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Atrophin-1
BAH
ELM2
GATA
Myb_DNA-binding
DUF7952
DUF7573
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
116665
NCBI-ProteinID:
NP_446337
RGD:
629475
Ensembl:
ENSRNOG00000017940
UniProt:
Q62901
A6IUD6
LinkDB
All DBs
Position
5:166048770..166380559
Genome browser
AA seq
1559 aa
AA seq
DB search
MTADKDKDKDKEKDRDRDRDRERDKRDKARESENARPRRSCTLEGGAKNYAESDHSEDED
NDNGATTEESARKSRKKPPKKKSRYERTDTGEITSYITEDDVVYRPGDCVYIESRRPNTP
YFICSIQDFKLVHNSQACCRSPAPALCDPPACSLPVASQPPQHLSEAGRGPVGSKRDHLL
MNVKWYYRQSEVPDSVYQHLVQDRHNENDSGRELVITDPVIKNRELFISDYVDTYHAAAL
RGKCNISHFSDIFAAREFKARVDSFFYILGYNPETRRLNSTQGEIRVGPSHQAKLPDLQP
FPSPDGDTVTQHEELVWMPGVSDCDLLMYLRAARSMAAFAGMCDGGSTEDGCVAASRDDT
TLNALNTLHESSYDAGKALQRLVKKPVPKLIEKCWTEDEVKRFVKGLRQYGKNFFRIRKE
LLPNKETGELITFYYYWKKTPEAASSRAHRRHRRQAVFRRIKTRTASTPVNTPSRPPSSE
FLDLSSASEDDFDSEDSEQELKGYACRHCFTTTSKDWHHGGRENILLCTDCRIHFKKYGE
LPPIEKPVDPPPFMFKPVKEEDDGLSGKHSMRTRRSRGSMSTLRSGRKKQPASPDGRASP
VNEDVRSSGRNSPSAASTSSNDSKAEAVKKSAKKVKEEAASPLKNTKRQREKVASDTEDT
DRATSKKTKTQEISRPNSPSEGEGESSDSRSVNDEGSSDPKDIDQDNRSTSPSIPSPQDN
ESDSDSSAQQQMLQTQPPALQAPSGAASAPSTAPPGTTQLPTPGPTPSATTVPPQGSPAT
SQPPNQTQSTVAPAAHTLIQQTPTLHPPRLPSPHPPLQPMTAPPSQNSAQPHPQPSLHGQ
GPPGPHSLQTGPLLQHPGPPQPFGLTPQSSQGQGPLGPSPAAAHPHSTIQLPASQSALQP
QQPPREQPLPPAPLAMPHIKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPAL
KPLSSLSTHHPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQSLPPPAASHPTTGGLHQV
PSQSPFPQHPFVPGGPPPITPPSCPPTSTPPAGPSSSSQPPCSAAVSSGGNVPGAPSCPL
PAVQIKEEALDEAEEPESPPPPPRSPSPEPTVVDTPSHASQSARFYKHLDRGYNSCARTD
LYFMPLAGSKLAKKREEAIEKAKREAEQKAREEREREKEKEKEREREREREREAERAAQK
ASSSAHEGRLSDPQLSGPGHMRPSFEPPPTTIAAVPPYIGPDTPALRTLSEYARPHVMSP
TNRNHPFYMPLNPTDPLLAYHMPGLYNVDPTIRERELREREIREREIRERELRERMKPGF
EVKPPELDPLHPATNPMEHFARHSALTIPPAAGPHPFASFHPGLNPLERERLALAGPQLR
PEMSYPDRLAAERIHAERMASLTSDPLARLQMFNVTPHHHQHSHIHSHLHLHQQDPLHQG
SAGPVHPLVDPLTAGPHLARFPYPPGTLPNPLLGQPPHEHEMLRHPVFGTPYPRDLPGAI
PPPMSAAHQLQAMHAQSAELQRLAMEQQWLHGHPHMHGGHLPSQEDYYSRLKKEGDKQL
NT seq
4680 nt
NT seq
+upstream
nt +downstream
nt
atgacagctgacaaagataaagacaaagacaaagagaaggaccgggaccgggaccgggac
cgagagagagataaaagagacaaagctagggagagcgagaacgccaggcctcggaggagc
tgcacgttggagggaggagccaagaactatgctgaaagtgaccacagtgaggacgaagac
aacgacaacggagccaccacggaggagtccgccaggaagagcagaaagaaacctccgaaa
aaaaagtcccgctacgagaggacagacactggcgagataacgtcttacatcactgaggat
gatgttgtttacagaccaggagactgcgtgtatatcgagagtcggcggccaaacacaccg
tatttcatctgcagcatccaagacttcaaactggtccacaactcccaggcctgttgcaga
tctccagctcctgctttgtgtgatcccccagcatgctctctgccggtggcatcacagcca
ccacagcacctttctgaagccgggagagggcctgtagggagtaagagggaccatctactc
atgaacgtcaaatggtactaccgtcagtctgaagttccagattctgtctatcagcatttg
gttcaggaccggcataatgaaaacgactctggaagagaacttgtcatcacagatccagtc
atcaagaaccgggagctcttcatttctgattatgttgacacctaccatgctgctgccctg
agagggaagtgcaacatctcccatttttccgacatatttgctgctcgtgaatttaaagcc
cgagtggactcgtttttctacatattaggctacaaccctgagacaaggaggctgaatagt
acccaaggagaaattcgagttggccctagccatcaggccaaacttccagatttgcagcca
tttccttctccagatggtgacactgtgactcagcatgaggaacttgtctggatgcctgga
gtcagtgactgtgacctcctcatgtacttgagggcagcaaggagcatggcagccttcgca
ggaatgtgtgacggaggttccacagaggatggctgtgtcgcagcgtctcgggatgacacc
actctcaatgcactgaacacactacatgaaagcagttatgatgccggcaaagccctgcag
cgcctggtgaagaagcctgtgcccaagctgatcgagaagtgctggacagaggatgaagtg
aaacgcttcgttaaggggctccgacagtacggcaagaacttcttcagaatcagaaaggag
ctgcttcccaataaggaaaccggggaactgattaccttctattactactggaagaaaaca
ccagaggcagccagctcccgtgcccaccgccggcaccgcaggcaggctgtgttcagaaga
attaagactcgcacagcgtccacccctgtcaacacgccctccagacctccttccagtgaa
ttcttggatctgagttcggctagtgaggatgactttgacagtgaggacagcgagcaggag
ctgaaggggtacgcctgccggcactgcttcaccaccacctccaaagactggcaccacggg
ggccgagaaaacatcctgctgtgcacagactgccgcatccacttcaagaagtacggtgag
ctgccacccatcgagaagcccgtggaccccccgcccttcatgttcaagcctgtcaaggag
gaggacgatgggctcagtgggaagcatagcatgaggactcggcggagtcggggctcgatg
tctacactccgcagtggtcggaagaagcagcctgccagtcctgatggccgcgcctcacct
gtcaatgaggacgtgcgatccagtggccggaactcccccagcgctgccagcacttccagc
aatgacagcaaagcagaggctgtgaagaagtcggccaagaaagtgaaggaagaggctgcg
tcccctctgaagaacaccaagcgccagcgggagaaggtggcctccgacacagaagacact
gacagggccacctccaaaaagacaaagacccaggagatcagccgccctaactctccctct
gaaggtgagggggagagttccgacagtcgcagtgtcaatgatgagggcagcagtgaccca
aaagacatcgaccaggataatcgcagcacgtcccccagtatccccagccctcaagataat
gagagcgactcggactcatcagcacagcagcagatgttgcagacccagcctccagccttg
caagctcccagtggggctgcctctgctccctccacagcccctccagggacaacccagctt
cccaccccagggcctacaccctctgctactacagtccctccacagggctcccctgcaacc
tcacagccccctaaccagactcagtctacagtggcacctgcagcccacaccctcatccag
cagacgcccaccctgcatccccctcggctgccctcacctcatcctccactgcagcctatg
actgcaccacctagccagaactctgcacaacctcacccccagccctccttgcatggtcag
ggccctcctggccctcacagcctacagactggacccctactacagcacccaggacctcct
cagccctttggactgactccccagtcctcccaaggtcagggccctctgggtccctcccca
gcagcagcccatcctcacagcaccatacagcttccagcctctcagtcggcactgcagcct
caacagcccccaagggaacagcccttgcctcctgccccgttagccatgcctcacatcaaa
cccccacccaccacaccaattccccagcttccagcaccacaggcccacaaacatccgcct
cacctctcaggcccctcccccttctcaatgaatgccaatctgccacccccaccagccctg
aagcccctcagctcactgtccacacaccatcctccctcagcccaccctccacccctacag
cttatgcctcagagccagcccttgccctcttcacccgcccagccccctgggctgacccag
agtcagagcctcccaccccctgctgcctcccaccctaccactggcggcctccaccaggtg
ccctcgcaatccccattcccccagcacccttttgtacctggaggcccccctcccatcacc
ccaccctcctgcccccccacttccacccctcctgcggggcccagctcctcatcacagcca
ccctgctctgctgctgtgtcttctggaggcaatgttccaggggcgccatcttgcccactc
cctgctgtgcagatcaaggaagaggctctggatgaagccgaggagccagagagccctcct
ccaccccccaggagcccatcccctgagcctactgtagtggacacccccagccatgctagc
cagtctgccaggttctacaaacacctggaccggggctacaactcgtgtgcacggacagac
ctgtacttcatgcctctggctggatccaaactagccaagaagagggaggaggccattgag
aaggccaagcgggaggctgaacagaaagcccgagaggaacgagagcgagagaaagagaag
gaaaaagagcgagagcgggagagagagcgggaacgggaagcagagcgcgctgctcagaag
gcttctagctcagcacatgaaggccgtcttagtgaccctcagctcagtggtccaggtcac
atgcgaccctccttcgagccaccaccgaccacaattgctgctgtgcccccatatattggg
cctgacacacctgccctccggacactgagcgaatatgctcggccacatgtcatgtctccc
accaaccgtaaccaccccttctacatgcccctcaatcccaccgaccccctcctggcctac
cacatgcctggcctgtacaatgttgaccccaccatccgggagcgggagctccgagaacgt
gagatcagagagcgcgagatccgggagcgggaattgcgggagaggatgaagccaggcttt
gaggtgaagcccccagagctggaccccctgcacccagccaccaaccccatggagcatttt
gcccggcacagcgccctcaccatccctcctgcagctggcccccacccctttgcctctttc
cacccgggcctcaaccctttggagcgggagagactggcgctagcaggtcctcagctgcgg
cctgagatgagttacccagacagactggcagctgagcgcatccatgccgagcgtatggcg
tcactcaccagcgaccccctggcacgactgcagatgttcaatgttactccacaccaccac
cagcattcacacatccactcccacctccacctccaccagcaggatcctctccaccaaggt
tcagcaggcccagttcaccccctggttgaccccctgactgctggccctcacttagctcgc
ttcccctaccctccgggcaccctccccaatcctctacttggacagcccccccacgagcac
gagatgctacgccacccagtttttggcaccccctacccccgagacctgcctggggctatt
ccaccccccatgtcagcggcccaccagcttcaggccatgcatgcccagtcagcagagctg
cagagactagccatggagcagcagtggctgcatggacatccacacatgcatggtggccat
ctacccagtcaggaggattattacagtcgactgaagaaggaaggagacaagcagttataa
DBGET
integrated database retrieval system
