Rattus norvegicus (rat): 116666
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Entry
116666 CDS
T01003
Symbol
Lman1
Name
(RefSeq) protein ERGIC-53 precursor
KO
K10080
lectin, mannose-binding 1
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116666 (Lman1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rno04131
]
116666 (Lman1)
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
rno04091
]
116666 (Lman1)
Membrane trafficking [BR:
rno04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
116666 (Lman1)
Lectins [BR:
rno04091
]
L-type lectins
116666 (Lman1)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_leg-like
Bact_lectin
Lectin_legB
ATG17_like
KxDL
Golgin_A5
PRP1_N
DUF4407
Motif
Other DBs
NCBI-GeneID:
116666
NCBI-ProteinID:
NP_446338
RGD:
71020
Ensembl:
ENSRNOG00000024470
UniProt:
Q62902
Structure
PDB
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All DBs
Position
18:complement(61778971..61800960)
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AA seq
517 aa
AA seq
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MAVSRRRGPQAGAQSFFCALLLSFSQFVGSDGMGGDAAAPGAAGTQAELPHRRFEYKYSF
KGPHLVQSDGTVPFWAHAGNAIPSADQIRIAPSLKSQRGSVWTKTKAAFENWEVEVTFRV
TGRGRIGADGLAIWYTENQGLDGPVFGSADMWNGVGIFFDSFDNDGKKNNPAIVVVGNNG
QINYDHQNDGATQALASCQRDFRNKPYPVRAKITYYQKTLTVMINNGFTPDKNDYEFCAK
VENMVIPTQGHFGISAATGGLADDHDVLSFLTFQLTEPGKEPPTPEKDISEKEKEKYQEE
FEHFQQELDKKKEEFQKGHPDLQGQPADDIFESIGDRELRQVFEGQNRIHLEIKQLNRQL
DMILDEQRRYVSSLTEEISRRGAGTPGQPGQVSQQELDTVVRTQLEILRQVNEMKNSMRE
TMRLVSGVQHPGSAGVYETTQHFMDIKEHLHIVKRDIDSLAQRSMSSNEKPKCPDLPAFP
SCLSTVHFVIFIVVQTVLFIGYIMYRTQQEAAAKKFF
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgtccaggcggcggggtccccaggctggagcgcagtcgttcttctgcgccctg
ctgctgtctttcagccaattcgtcgggagcgacggcatgggaggagatgctgcggctccc
ggcgccgcaggcacccaggccgagttgccacaccgccgtttcgagtacaaatacagcttt
aaggggccgcatctggtgcagagcgatgggaccgtgcccttttgggcccacgcggggaat
gctattccaagtgcagatcagatccgaatagcaccgtccttaaagagccaaagaggttcc
gtgtggaccaaaacaaaagcagccttcgagaactgggaagtggaagtgacattccgagtg
accggaagaggtcgaattggagctgatggcttagcaatttggtatacagaaaaccaaggc
ttggacggccctgtgtttggatcagctgatatgtggaatggtgttggaatattttttgat
tcttttgacaatgacggaaagaaaaacaatcctgctatagtagttgtaggcaacaatgga
caaatcaattatgaccaccaaaatgatggtgccactcaagccttagcgagttgtcagagg
gacttccgtaataaaccctatcctgtccgggcaaagattacctattaccagaaaacactg
acggtcatgatcaataatggctttacaccagataaaaatgattatgaattctgtgccaaa
gtggaaaatatggttatccccacgcaagggcattttgggatatctgctgcaacaggaggt
cttgcagatgaccacgatgttctctctttcctgactttccaactaaccgagcccggaaaa
gagccacctacgccagaaaaagacatttcagaaaaagaaaaggaaaagtatcaagaggag
tttgaacacttccagcaagaattagacaagaagaaggaggaattccagaagggccaccct
gacctccaggggcagccagcggatgacatctttgagagcataggggatcgggagctgaga
caagtgtttgaaggacaaaatcgcattcatctggagatcaagcaacttaaccggcagctg
gatatgattctcgatgaacagaggagatacgtgtcttctctgacagaggagatttccagg
agaggagcagggaccccaggacagcctgggcaggtctcccaacaggaactggacactgtt
gtgaggacccagctggagattttgagacaagtgaatgagatgaagaactccatgcgtgag
accatgcggctggttagtggcgtccagcacccaggctcggccggcgtctacgagacaacc
cagcacttcatggacatcaaggagcacctgcacatcgtgaagagagatatcgacagcctc
gcgcagcgcagcatgtcatctaatgaaaaaccaaaatgcccagatctaccagcattcccg
tcgtgtctgtccacagtccactttgtgatatttatagtggtgcagacggtgttgttcatt
ggctacatcatgtacaggactcagcaagaagcagctgccaaaaaattcttctga
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