Rattus norvegicus (rat): 116673
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Entry
116673 CDS
T01003
Symbol
Sdc3
Name
(RefSeq) syndecan-3 precursor
KO
K16337
syndecan 3
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04514
Cell adhesion molecules
rno04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116673 (Sdc3)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116673 (Sdc3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
rno00535
]
116673 (Sdc3)
Proteoglycans [BR:
rno00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
116673 (Sdc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syndecan
Motif
Other DBs
NCBI-GeneID:
116673
NCBI-ProteinID:
NP_446345
RGD:
621486
Ensembl:
ENSRNOG00000011927
UniProt:
P33671
G3V9B7
A6ISP8
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All DBs
Position
5:148249792..148282524
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AA seq
442 aa
AA seq
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MKPGPPRRGTAQGQRVDTATHGPGARGLLLPPLLLLLLAGRAAGAQRWRNENFERPVDLE
GSGDDDSFPDDELDDLYSGSGSGYFEQESGLETAMRFIPDIALAAPTAPAMLPTTVIQPV
DTPFEELLSEHPGPEPVTSPPLVTEVTEVVEEPSQRATTISTTTSTTAATTTGAPTMATA
PATAATTAPSTPAAPPATATTADIRTTGIQGLLPLPLTTAATAKATTPAVPSPPTTVATL
DTEAPTPRLVNTATSRPRALPRPVTTQEPEVAERSTLPLGTTAPGPTEVAQTPTPESLLT
TTQDEPEVPVSGGPSGDFELQEETTQPDTANEVVAVEGAAAKPSPPLGTLPKGARPGLGL
HDNAIDSGSSAAQLPQKSILERKEVLVAVIVGGVVGALFAAFLVTLLIYRMKKKDEGSYT
LEEPKQASVTYQKPDKQEEFYA
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgaagcccgggccgccgcgccgcgggaccgcacaggggcagcgcgtggacaccgccacc
catgggcccggggcccgcgggttgttactgccaccgctgctgctgctgttgctggccggc
cgcgccgcgggggctcaacgctggcgcaatgagaacttcgagaggccggtggatcttgag
ggctcaggggacgacgactcatttcctgatgatgaactggatgacctctactcggggtcg
ggctctggctacttcgagcaggagtccggccttgagacagccatgcggttcattcctgac
atagccctggctgcacccaccgcacctgccatgctacccacgaccgttatccagcccgtg
gataccccgtttgaggaactcctttctgagcatcccggccccgaaccagtcaccagtccc
ccactggtgacagaggtgacagaagttgtagaagagcccagtcagagagccaccactatc
tccaccaccacatctaccactgcagccaccaccacaggggccccaactatggccacagca
cctgctacagcagccaccactgcccctagcactcccgcggcaccccctgccacggccacc
acggctgacataaggaccaccggcatacaagggctgctgcctcttcccctgaccacggct
gccacagccaaggccactaccccagcagtaccctcaccacccactactgtggctaccttg
gacacagaggccccgacacctaggctggtcaacacagctacctctcggccacgagccctt
cctcggccagtcaccacccaggagcctgaagttgctgagaggagtaccctgccgttgggg
accaccgctcctggacccacagaggtggctcagaccccaactccagagtcccttctgacc
acgacccaggatgagccagaggtgccagtaagcggggggcccagcggggactttgagctg
caagaagagaccacacagccagacacagccaatgaagtggtggcggtggaaggagccgcg
gccaagccatcacctccactggggacactacccaagggtgcccgcccaggccttggcctc
cacgacaatgccatcgactcgggcagctctgctgcccagctccctcagaagagcatacta
gagcggaaggaggtgctcgtagctgtgatcgtaggtggcgtggtgggcgccctcttcgct
gccttcctggtcacgttgctcatctaccgcatgaagaagaaggacgaaggcagctacacc
ttggaagagcccaagcaggcaagcgtcacataccagaagcccgacaagcaggaggagttc
tatgcttag
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