Rattus norvegicus (rat): 116741
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Entry
116741 CDS
T01003
Symbol
Pcdha4
Name
(RefSeq) protocadherin alpha-4 precursor
KO
K16493
protocadherin alpha
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
116741 (Pcdha4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rno03036
]
116741 (Pcdha4)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rno04515
]
116741 (Pcdha4)
Chromosome and associated proteins [BR:
rno03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
116741 (Pcdha4)
Cell adhesion molecules [BR:
rno04515
]
Cadherins
Protocadherins
116741 (Pcdha4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_tail
Cadherin_2
Cadherin_FAT4_N
Ig_Cad99C_N
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
116741
NCBI-ProteinID:
NP_446385
RGD:
620337
Ensembl:
ENSRNOG00000020119
UniProt:
Q767I8
Q593X7
LinkDB
All DBs
Position
18:28688274..29120227
Genome browser
AA seq
947 aa
AA seq
DB search
MEFSWGSGQESQRLLLSFLFLAIWEPGNSQLHYSIPEEAKHGTFVGRIAQDLGLELAELV
PRLFRVASKDRGDLLEVNLQNGILFVNSRIDREELCGRSAECSIHLEVIVDRPLQVFHVE
VEVRDINDNPPTFPTTQKNLFIAESRPLDTWFPLEGASDSDIGINAVLTYRLSPNDYFSL
EKPTNSERVKGLGLILRKSLDREETPELFLVLTVTDGGKPELTGSVQLLITVLDANDNSP
VFDRSLYTVKLPENVPNGTLVVKVNASDLDEGANGEVMYSFSTDISPNVKNKFHIDPVTG
EIAVKGYIDFEECTSYEILIEGIDKGQLPLSGHCKVIVQVEDINDNAPELEFKSLSLPIR
ENAPVGTVIALISVFDPDTGVNGQVTCSLTPQVPFKLVSTFKNYYSLVLDSALDRETTAD
YKVVVIARDGGLPSLWATASVSVEVADVNDNAPAFAQPEYTVFVKENNPPGAHIFTVSAV
DADSQENALVSYSLVERRVGERLLSSYVSVHAESGKVFALQPLDHEELELLQFQVSARDA
GVPALGSNVTLQVFVLDENDNAPTLLEPEAGISGGIVSRLVSRSVGAGHVVAKVRAVDAD
SGYNAWLSYELQSSEGNSRSLFRVGLYTGEISTTRSLDEADSPRQRLLVLVKDHGDPAMM
VTATVLVSLVENGPLPKAPSRVSTRVTNAEASLVDVNVYLIIAICAVSSLLVLTLLLYSA
LRCSTVPSESVCGPPKPVMVCSSAVGSWSYSQQRRQRVCSGEYPPKTDLMAFSPSLSDSR
DREDQLQSTEDSSGKPRQPNPDWRYSASLRAGMHSSVHLEEAGILRAGPGGPDQQWPTVS
SATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQPGPGELPDKFIIPGSPAIISIRQES
ANNQIDKSDFITFGKKEETKKKKKKKKGNKTQEKKEKGNSTTDNSDQ
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atggaattttcctggggaagtggccaggaatcccagcgcctgcttctctcttttctgttt
cttgcaatctgggagccaggaaacagccagctccactactccatcccagaggaggccaaa
cacggcaccttcgtgggccgcatcgcacaggacctggggctggagctggcggagctggtg
cctcgcctgttcagggtggcgtccaaggaccgcggagaccttctggaggtaaatctgcag
aatggcattttgtttgtgaattctcggatcgatcgggaggagctgtgcgggaggagtgcg
gagtgtagcatccacttggaggtgatcgtggacaggccgctgcaggttttccacgtggag
gtagaggtgagggacattaacgacaaccctcccacgttcccaaccacacaaaagaatctg
ttcatcgcagaatcaaggccacttgacacttggtttccactagagggcgcttcagattca
gatatcggaatcaatgctgtgctgacttacagactaagtccaaatgattacttttctttg
gaaaaaccaaccaacagtgaacgggtaaaaggtcttgggcttatattacggaaatcttta
gaccgggaggaaactccagagttatttttagtgctcactgtcacggatggaggaaagccc
gagctgactggcagtgttcagttactcatcacagtgctggatgccaacgataattctcca
gtttttgacagatctctctataccgtgaaattaccagaaaacgtcccaaatgggacattg
gtagtcaaagtcaatgcctcagatttagatgaaggcgccaatggggaagttatgtattca
ttttctacagatatttcaccaaatgtgaaaaacaaattccacatagacccggttaccgga
gagatcgctgtaaagggatacattgattttgaagaatgcacatcctatgaaattctcata
gagggaattgacaagggacaacttcccctctctggacactgtaaagttattgtacaagtt
gaagacatcaatgataacgccccagagttggaattcaaatctctatcacttccaatcaga
gagaatgctccggtgggaactgtcatcgcactcatcagtgtgtttgatccggacacgggt
gtcaatgggcaggttacttgctccctgactcctcaggtccccttcaagctggtgtccact
ttcaagaattactattcgcttgtgttggacagcgccctggaccgggagaccacagctgac
tataaggtggtagtgatagcccgggatgggggcttgccctcgctgtgggccacggccagt
gtgtccgtggaggtggctgacgtgaacgacaatgcccctgcgttcgcacagcctgaatac
acggtgtttgtgaaggagaacaacccacctggagcgcacatcttcacggtatccgcggtg
gacgcagactcacaggagaacgcgctggtgtcctactcgctggtggagcggcgggtgggc
gagcgcttgctgtcaagctatgtctctgtgcacgcggagagcggcaaggtgttcgcactg
cagcctctggaccatgaggagctggagctgctgcagttccaggtgagcgcgcgggatgct
ggtgtgcctgccctgggcagcaatgtgactctgcaggtgtttgtgctggatgagaacgac
aacgcgcccaccctgctggaacccgaggcaggaatctctggtggaatcgtgagccggcta
gtgtccagatcagtaggtgcgggccatgtggtggccaaagtgcgcgcggtggatgcggac
tctggctataatgcatggctctcttatgagctgcaatcgtcagaaggcaattcccgtagc
ctattccgtgtgggtctatatacgggcgagattagtactacgcgcagcttggatgaagca
gattcgccgcgtcagcgccttctggtgctggtgaaggaccatggcgacccagcaatgatg
gttactgccacagtgttggtgtcgctggtagagaatggcccgctaccaaaggctccatcg
cgagtgtccacaagagtcacaaacgcggaggcgtcactggtggatgtcaacgtgtatctg
atcatcgccatctgtgcagtatccagcctgttagtgctcacgctgctgctgtacagtgcc
ctgcgctgctccactgtccccagtgagagcgtgtgcgggcctccaaaaccagtaatggtg
tgctccagcgcagtggggagctggtcatactctcagcaaaggaggcaaagggtgtgctct
ggagagtacccacctaagaccgacctcatggcctttagtcccagtctatctgattcaagg
gacagagaggatcaattgcagtccacagaggattcctctggaaagccccgacagcccaac
cctgactggcgctactctgcctcgctaagagccggcatgcacagctctgtgcacctggag
gaggctggcattctacgggctggtccaggagggcctgatcaacagtggccaacagtatcc
agtgcaacaccagaaccagaggcaggagaggtgtcccctccagtgggcgctggtgtcaac
agcaacagctggacctttaaatacggacccggcaaccccaaacagcccggtcccggtgag
ttgccagacaaattcattatcccaggatctcctgcaatcatctccatccggcaggagtct
gctaacaaccaaattgacaaaagcgattttataaccttcggcaaaaaggaggagaccaag
aaaaagaagaaaaagaagaagggtaacaagacccaggagaaaaaagagaaagggaacagc
acgacggacaacagtgaccagtga
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