Rattus norvegicus (rat): 117048
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Entry
117048 CDS
T01003
Symbol
Cdh17
Name
(RefSeq) cadherin-17 precursor
KO
K06811
cadherin 17, LI cadherin
Organism
rno
Rattus norvegicus (rat)
Pathway
rno05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09160 Human Diseases
09162 Cancer: specific types
05226 Gastric cancer
117048 (Cdh17)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rno04515
]
117048 (Cdh17)
Cell adhesion molecules [BR:
rno04515
]
Cadherins
Major cadherins
117048 (Cdh17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_3
RibLong
Cadherin_4
RET_CLD1
He_PIG
SKG6
Big_9
Motif
Other DBs
NCBI-GeneID:
117048
NCBI-ProteinID:
NP_446429
RGD:
619748
Ensembl:
ENSRNOG00000015562
UniProt:
P55281
A6II73
LinkDB
All DBs
Position
5:30024544..30112226
Genome browser
AA seq
827 aa
AA seq
DB search
MVSAQLHFLCLLTLYLTGAYGQEGKFSGPLKPMTFSIFEGQEPSQIIFQFKANPPAVTFE
LTGETDGIFKIEKDGLLYHTRVLDRETRAVHHLQLAALDSQGAIVDGPVPIIIEVKDIND
NRPTFLQTKYEGSVRQNSRPGKPFMYVNATDLDDPATPNGQLFYQIVIQLPKINNVMYFQ
IDNKTGAISLTPEGSQVLDPIKNPYYNLVVSVKDMGGQNENSFSDTTSVDITVRENIWKA
PEPVEIRENLTDPHPIKITQVQWNDPGAHYSLINKEKLPQFPFSIDQEGNIYVTQPLDRE
EKDSHVFFATAKDENGKPLAYPLEIRVKVIDINDNPPTCLSQVTVFEVQENEVLGSSIGI
FAAHDMDEANNINSILKYRLVDQTPKVPSDELFLIDEYGGKVQLGKRSLKKQDSPQYNLT
VEVSDIDFKTLCSLQVNVIDINDQIPIFERSDYGSKTLSEDTAIGSTILIIQATDDDEPF
TGSSKILYKIVQGDTEGRLEVVTDPMTNTGYVKIRKPLDFETEPVTSIVFKAENPEPLVN
GIEYNASSFASFELTVTDVNEVPVFPQQIFQANVSEDTAIGTKVGTVTARDPEGLTVSYS
LKDNKRGWLKIDSVTGDIFSTAPLDRETESVYRVQVVATEVGGSSLSSTAYFHLVLMDVN
DNPPRLAKDYTGLFFCHPLSAPGSLIFEATDDDQQSVRRPKFTFALGRESLQSDWEVSKI
NGTHARLSTKHTRFEEQVYDIPILINDGGQPPMEGIVSLSVTFCQCVDGSCFRPAGNQVG
IPTVGMAVGILLTTFLVIGIILAVVFIRMRKDKVEDPQSPENKPLRS
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atggtctctgcccagcttcacttcctgtgtcttctcacgctttatttgactggcgcatat
ggccaagaagggaagttcagcggccccctgaaacccatgacattctctatttttgaaggc
caagaaccgagtcaaatcatattccagtttaaggccaaccctccagctgtgacttttgag
ctaacaggagagacggatggtatatttaagatagaaaaggatggacttctttatcacaca
agagtcctggacagagaaacaagggcggttcatcatctgcagcttgcagccttggattct
cagggagctatagtggatggcccagtccccatcatcatagaagtcaaggacatcaatgac
aaccgacctacatttctccagacaaaatatgaaggctcagtgaggcagaactctcgccca
ggaaagcctttcatgtatgtcaatgctacagacctggatgacccggctactcccaatggc
cagcttttttatcaaattgtcatccagcttcccaaaatcaacaatgttatgtacttccag
atcgacaacaaaacaggggcaatctcgcttaccccagaaggttctcaggtattggatcca
ataaagaatccgtactacaacctggtggtctctgtgaaggacatggggggccagaatgag
aattccttcagcgataccacatctgtggatattactgtcagagagaacatctggaaagca
ccagagcctgtggagattcgagaaaacttaactgatcctcaccccatcaaaatcactcag
gtgcagtggaatgacccaggggcccactattccttaatcaacaaggagaagctgccacag
tttccattctcgatcgaccaagaaggaaatatttacgtgactcagcctttggaccgtgag
gaaaaggactctcatgttttctttgccactgccaaggatgagaatggaaaacccctcgca
tatccactggaaattcgtgtgaaagttattgacattaatgacaacccaccgacatgtctc
tctcaagtgactgtatttgaagtccaggagaatgaagtcttgggtagtagcattgggatc
tttgctgcccacgatatggatgaagctaacaatatcaacagtattttgaagtacagactt
gtagaccaaacacccaaagttccctcagatgaactctttctcattgacgaatatggagga
aaggtccagttgggtaaacggtccttgaagaagcaagacagtcctcagtacaacttaaca
gtagaggtgtctgacatagatttcaagactctctgttctcttcaagtcaacgttattgat
atcaacgatcagattcccatctttgaaagatcagactatggaagcaagactctttctgaa
gacacagccatcggatccaccatcttaatcatccaagctactgatgatgatgagcccttt
accgggagctctaaaattctgtacaagattgtacagggagacactgagggaagactggaa
gttgtcacagatcccatgaccaatacaggatacgtcaagatcagaaagcctcttgatttt
gaaaccgaaccagttactagcattgtgttcaaagcagaaaaccctgagccgctggtgaat
ggcatagagtacaatgctagttcttttgcctccttcgagctgaccgtgacggatgtgaat
gaagtgcctgtatttccccagcaaatattccaagccaacgttagcgaggatactgctata
ggcactaaagtgggcactgtgactgccagggatccggaaggcctgactgtgagttattca
ctgaaagacaataagagaggttggcttaaaatcgactccgtcaccggcgacatatttagc
actgctccgctggacagggaaacagaaagtgtgtatcgagtacaagtggtggccactgaa
gtaggtgggtcctctctgagttctacagcatatttccacctggtcctcatggatgtgaat
gacaacccccctcgcctagctaaggactacacaggcttgttcttctgccatcccctaagt
gcccctgggagcctcatctttgaagccactgatgatgaccagcagtcagttcggaggccc
aagtttacgtttgcccttggcagagaaagcttacaaagtgactgggaagtgtccaaaatc
aatggcacacatgctagactctccaccaagcacacacgctttgaggaacaagtttatgac
atcccaatcctcatcaatgatggggggcagccacccatggaaggcattgtctccttatca
gttactttctgccagtgtgtggacggaagttgtttccggccagcaggcaaccaggttggg
atacccaccgtgggcatggcagttggtatacttctgaccacatttctggtcattggtata
attttagcggttgtattcatccgtatgaggaaagataaagttgaagatccacagtcccct
gagaataagcctctgaggagctga
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integrated database retrieval system