Rattus norvegicus (rat): 117280
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Entry
117280 CDS
T01003
Symbol
Hnrnpu
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein U
KO
K12888
heterogeneous nuclear ribonucleoprotein U
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117280 (Hnrnpu)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rno03041
]
117280 (Hnrnpu)
Spliceosome [BR:
rno03041
]
Common components
Common spliceosomal components
hnRNP proteins
117280 (Hnrnpu)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_33
SPRY
SAP
SRP54
AAA_18
Motif
Other DBs
NCBI-GeneID:
117280
NCBI-ProteinID:
NP_476480
RGD:
620372
Ensembl:
ENSRNOG00000033790
UniProt:
Q6IMY8
LinkDB
All DBs
Position
13:complement(92609791..92618580)
Genome browser
AA seq
798 aa
AA seq
DB search
MSSSPVNVKKLKVSELKEELKKRRLSDKGLKADLMDRLQAALDNEAGGRPAMEPGNGSLD
LGGDAAGRSGAGLEQEAAAGAEDDEEEEGIAALDGDQMELGEENGAAGAADAGAMEEEEA
ASEDENGDDQGFQEGEDELGDEEEGAGDENGHGEQQSQPPAAAQQASQQRGPGKEAAGKS
SGPTSLFAVTVAPPGARQGQQQAGGDGKTEQKAGDKKRGVKRPREDHGRGYFEYIEENKY
SRAKSPQPPVEEEDEHFDDTVVCLDTYNCDLHFKISRDRLSASSLTMESFAFLWAGGRAS
YGVSKGKVCFEMKVTEKIPVRHLYTKDIDIHEVRIGWSLTTSGMLLGEEEFSYGYSLKGI
KTCNCETEDYGEKFDENDVITCFANFETDEVELSYAKNGQDLGVAFKISKEVLADRPLFP
HVLCHNCAVEFNFGQKEKPYFPIPEDCTFIQNVPLEDRVRGPKGPEEKKDCEVVMMIGLP
GAGKTTWVTKHAAENPGKYNILGTNTIMDKMMVAGFKKQMADTGKLNTLLQRAPQCLGKF
IEIAARKKRNFILDQTNVSAAAQRRKMCLFAGFQRKAVVVCPKDEDYKQRTQKKAEVEGK
DLPEHAVLKMKGNFTLPEVAECFDEITYVELQKEEAQKLLEQYKEESKKALPPEKKQNTG
SKKSNKNKSGKNQFNRGGGHRGRGGFNMRGGNFRGGAPGNRGGYNRRGNMPQRGGGGGSG
GIGYPYPRGPVFPGRGGYSNRGNYNRGGMPNRGNYNQNFRGRGNNRGYKNQSQGYNQWQQ
GQFWGQKPWSQHYHQGYY
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgagttcttcgcctgttaatgtcaagaagctgaaggtgtcggagctgaaggaggagctc
aagaagcggcgcctctcagacaagggcctcaaggccgatctcatggatcgactccaggcc
gcgctggacaacgaggcaggaggccgccccgccatggagcccgggaacggcagcctcgac
ctgggtggcgatgcggccgggcgctcgggagcaggcctagagcaggaggccgcggccggc
gccgaagacgatgaggaggaggagggcattgccgctctggacggcgaccagatggagctg
ggcgaggagaacggggcggcgggggcggctgacgcgggcgcgatggaggaggaggaggcg
gcgtcggaagacgagaacggcgacgaccagggcttccaggagggggaggacgagctcggc
gacgaagaggagggcgcgggcgacgagaacggccacggggagcagcagtcccaaccgccg
gcggcggcgcagcaggcttctcagcagcgcgggcctggcaaggaggccgcggggaaaagc
agcggccccacctcgctcttcgcggtgacggtggcgccgccaggggcgaggcagggccaa
cagcaggcgggaggagacggcaaaacagaacagaaagctggagataaaaagagaggtgtt
aaaagaccccgggaagatcatggccgaggatattttgagtacattgaagaaaacaagtac
agcagagccaagtctcctcagccacctgttgaagaagaagacgaacacttcgatgacaca
gtggtttgtcttgatacttataattgtgatctgcattttaaaatatcaagagaccgtctc
agtgcttcttcccttactatggagagtttcgcttttctttgggctggaggaagagcttct
tatggtgtgtcaaaaggcaaagtctgctttgagatgaaggtaacagagaagattccagta
agacatttatatacaaaagatattgatatacatgaagttcggattggctggtcactaacc
acaagtggaatgttgcttggtgaagaagaattttcttatgggtattctctgaaaggaata
aaaacctgcaactgtgagacagaagattatggagagaagtttgatgaaaatgatgtgatt
acgtgctttgctaactttgagactgatgaagttgaactctcttacgcaaagaatggacaa
gatcttggtgttgcctttaagattagtaaggaagttcttgctgaccggccattattcccc
catgttctctgccataactgtgcagttgagtttaattttggtcaaaaggaaaagccatac
tttccaatacctgaagactgtacttttatccaaaatgtcccattagaggaccgagtcaga
ggaccaaaaggacctgaagagaagaaggattgtgaagttgtgatgatgattggcttgcca
ggagctggaaaaactacctgggttactaaacatgcagctgaaaaccctgggaaatataac
attcttggaacaaacactattatggacaaaatgatggtggcaggctttaagaagcaaatg
gcagatactggaaaactgaacacactgttgcagagagccccacagtgtcttggcaagttt
attgagattgctgcccgaaagaagcgaaattttattctggatcagacaaatgtgtctgct
gctgcccagaggagaaaaatgtgcctgtttgcaggcttccaacgaaaagccgtggtcgtt
tgcccaaaagacgaagactataagcagaggacacagaagaaagcggaagtagaggggaaa
gacctaccagagcatgctgtcctcaagatgaaaggaaacttcacccttccagaggttgca
gagtgttttgatgaaataacctatgttgaacttcagaaggaggaagcccagaagcttttg
gagcaatataaagaagaaagcaaaaaggcactgccaccagaaaaaaagcaaaacactggc
tcaaagaaaagcaataaaaataagagtggcaagaaccagttcaacagaggtggtggccat
agaggacgtggaggattcaatatgcgtggtggcaatttcagagggggagctcctgggaat
cgtggtggatataataggagaggcaacatgccccagagaggtggtggcggcggaagtggt
ggaattggctatccatacccgcgtggccctgtctttcctggccgaggtggttactcaaac
agaggaaattacaacagaggtggaatgcccaacagagggaactataaccagaacttcaga
ggacgaggaaataatcgtggctacaaaaatcaatctcagggctacaaccagtggcagcag
ggtcaattctggggtcagaagccatggagtcagcattatcaccaaggatattattga
DBGET
integrated database retrieval system
