Rattus norvegicus (rat): 117526
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Entry
117526 CDS
T01003
Symbol
Tbp
Name
(RefSeq) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03022
Basal transcription factors
rno05016
Huntington disease
rno05017
Spinocerebellar ataxia
rno05165
Human papillomavirus infection
rno05166
Human T-cell leukemia virus 1 infection
rno05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117526 (Tbp)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
117526 (Tbp)
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
117526 (Tbp)
05165 Human papillomavirus infection
117526 (Tbp)
09164 Neurodegenerative disease
05016 Huntington disease
117526 (Tbp)
05017 Spinocerebellar ataxia
117526 (Tbp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rno03000
]
117526 (Tbp)
03021 Transcription machinery [BR:
rno03021
]
117526 (Tbp)
Transcription factors [BR:
rno03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
117526 (Tbp)
Transcription machinery [BR:
rno03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
117526 (Tbp)
RNA polymerase III system
TFIIIB
117526 (Tbp)
RNA polymerase I system
SL1/TIF-1B
117526 (Tbp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
TFIIA
Presenilin
Tombus_movement
Motif
Other DBs
NCBI-GeneID:
117526
NCBI-ProteinID:
NP_001004198
RGD:
67398
Ensembl:
ENSRNOG00000001489
UniProt:
F7FBK7
Q66HB1
LinkDB
All DBs
Position
1:65136420..65153515
Genome browser
AA seq
318 aa
AA seq
DB search
MDQNNSLPPYAQGLASPQGAMTPGIPIFSPMMPYGTGLTPQPVQNTNSLSILEEQQRQQQ
QQQQQQQQQQQQAVATAAASVQQSTSQQPTQGASGQTPQLFHSQTLTTAPLPGTTPLYPS
PMTPMTPITPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVI
MRIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGS
CDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEI
YEAFENIYPILKGFRKTT
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggaccagaacaacagccttccaccttatgctcagggcttggcctccccacagggtgcc
atgactcctggaattcccatcttcagtccaatgatgccttacggcacagggcttactcca
cagcctgttcagaacaccaatagtttatctattttggaagagcaacaaagacagcagcag
cagcagcagcagcagcaacagcagcagcaacagcaggcagtagcaactgcagcagcctca
gtacagcaatcaacatctcagcagcccacacagggtgcctcaggccagaccccacaactc
ttccattctcaaactctaaccacagcaccattgccaggcaccacccccttgtatccttca
ccaatgactcctatgacccctatcactcctgccacaccagcctctgagagctctgggatt
gtaccacagctccaaaatattgtatccaccgtgaatcttggctgtaaacttgacctaaag
accattgcacttcgtgccagaaatgctgaatataatcccaagcggtttgctgcagtcatc
atgagaataagagagccacgaacaactgcgttgatcttcagttctgggaaaatggtgtgc
acaggagccaagagtgaagaacaatccagactagcagcaagaaaatacgctagagttgtg
cagaagctgggcttcccagctaagttcttagacttcaagatccagaacatggtggggagc
tgtgatgtgaagttccccataaggctggaaggccttgtgttgacccaccagcagttcagt
agctatgagccagaattatttcctggattaatctacagaatgatcaaacccagaattgtt
ctccttatttttgtttctggaaaagttgtattaacaggtgctaaagttagagcagagatt
tatgaagcatttgaaaacatctaccccatcttaaagggattcaggaagaccacatag
DBGET
integrated database retrieval system