KEGG   Rattus norvegicus (rat): 120103497
Entry
120103497         CDS       T01003                                 
Name
(RefSeq) general transcription factor IIH subunit 5-like
  KO
K10845  TFIIH basal transcription factor complex TTD-A subunit
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03022  Basal transcription factors
rno03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    120103497
  09124 Replication and repair
   03420 Nucleotide excision repair
    120103497
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rno03021]
    120103497
   03400 DNA repair and recombination proteins [BR:rno03400]
    120103497
Transcription machinery [BR:rno03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     120103497
DNA repair and recombination proteins [BR:rno03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     120103497
SSDB
Motif
Pfam: Tfb5 T4_MRH
Other DBs
NCBI-GeneID: 120103497
NCBI-ProteinID: XP_038969029
RGD: 41355253
Ensembl: ENSRNOG00000052193
LinkDB
Position
6:32828646..32833974
AA seq 71 aa
MANTLKGVLIECDSATKQFFLYLNESNALGKKFVIQDIDDTHAFVIVELVNVLQEQVGEL
MDQNASCLTQK
NT seq 216 nt   +upstreamnt  +downstreamnt
atggccaacaccttaaaaggagtgcttatagaatgtgattctgccacgaagcagttcttt
ctctacttgaatgagtccaatgccttgggaaagaagttcgtcattcaagacattgatgac
acacatgcctttgtcattgtggaactggttaatgtcctccaggagcaagtaggggaactg
atggaccagaatgcctcttgtcttacccagaagtga

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