Rattus norvegicus (rat): 134479414
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Entry
134479414 CDS
T01003
Name
(RefSeq) RING-type E3 ubiquitin-protein ligase PPIL2-like
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
134479414
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rno03041
]
134479414
03110 Chaperones and folding catalysts [BR:
rno03110
]
134479414
04121 Ubiquitin system [BR:
rno04121
]
134479414
Enzymes [BR:
rno01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
134479414
Spliceosome [BR:
rno03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
134479414
Complex C
U4/U6.U5 tri-SnRNP related factors
134479414
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
134479414
Chaperones and folding catalysts [BR:
rno03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
134479414
Ubiquitin system [BR:
rno04121
]
Ubiquitin ligases (E3)
U-box type E3
134479414
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Rtf2
U-box
zf-NOSIP
V-set_CD47
FOXO_KIX_bdg
Motif
Other DBs
NCBI-GeneID:
134479414
NCBI-ProteinID:
XP_063118844
UniProt:
A0A8I5Y218
LinkDB
All DBs
Position
6:complement(105755446..105757206)
Genome browser
AA seq
521 aa
AA seq
DB search
MGKRQHQKDKMYITCAEYIHFYGGRKPDITQTSFRRLPFDHCSLSLQPFVYPVCTPEGVV
FDLLNIVPWLKKYGTNPSTGEKLDGKSLIKLNFAKNSEGQYHCPVLYSVFTDNIHIVAIR
TTGNVYTYEAVEQLNIKAKNLRDLLTDEPFSRQDIITLQDPTNLDKFNVSSFFHVKNNMR
TIDPDEEKAKQDPSYYLKNTNAETRETLQELYKEFKGDEILAATMKPPEKKKVDQLNAAH
YSTGKVSASFTSTAMVPETTHEAAVIDEDVLRYQFVKKKGYVRLHTNKGDLNLELHCDLT
PRTCENFIKLCKKQYYDGTIFHRSIRNFVIQGGDPTGTGTGGESYWGKPFKDEFRPNLSH
TGRGVLSMANSGPNTNKSQFFITFRSCAYLDKKHTIFGRVVGGFDTLTEMENVESDPKTD
RPKEEVHICTTTVFVDPYEEADAQIAQERKKTQHQVDPEAKAKKKQPQPGNQGPPTYCRG
VGKYINPAATKRAAEEEPSTSTAIPTVKKRPSRGFGDFSSW
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggggaagcgacagcaccagaaggacaagatgtacatcacctgtgccgagtacattcat
ttctatggtggcaggaagccagatatcacacagacaagttttcgccgcttaccttttgac
cactgcagtctctctctccagccttttgtctacccagtctgcaccccggaaggtgttgtc
tttgacttgctgaacattgtcccatggcttaagaagtatgggaccaatccgagcactgga
gagaaacttgatgggaagtccctgattaagctgaactttgcgaagaacagtgaagggcag
taccactgtccagtgctgtactccgtgttcactgacaacatccacattgtggccatcagg
acaactggcaatgtctacacctatgaggcagtggagcagctaaacatcaaggccaagaac
ttgagggacctgttaactgatgagcccttttccaggcaagacatcatcaccctgcaggac
cccaccaatttggacaaatttaacgttagcagcttcttccatgtgaagaataacatgcga
acgatagatccagatgaggaaaaggccaaacaagacccatcttattatttgaaaaataca
aatgcggagacccgagagacgctacaggagctctacaaagagttcaaaggagatgagatt
ttagcagctaccatgaagccacctgagaagaagaaggtggaccaactaaatgctgcccac
tactccacagggaaggtcagcgcgtccttcacctctaccgccatggtgcctgagaccacg
cacgaagcagctgtcattgatgaagatgtcctgcgctaccagtttgtgaagaagaagggc
tatgtgaggctacataccaacaagggcgacctcaacctagagctgcactgtgacctgaca
ccaagaacctgtgaaaacttcatcaagctctgcaagaaacagtattatgatggtaccatc
tttcacaggtccatcaggaactttgtgatccagggtggtgaccctacaggtacaggcacg
ggtggagagtcatactggggcaagcctttcaaagatgagttccgtcccaatctttcacac
acaggccgtggggtgctcagcatggccaattcggggcccaacaccaacaagtctcagttc
ttcatcaccttccggtcctgtgcttacctggataagaagcataccatctttggacgggtt
gtcgggggctttgacacgctgacagagatggagaatgtggagagtgaccccaaaactgac
cgccctaaggaagaagtgcacatctgtacaaccaccgtgtttgtggatccctatgaggag
gccgatgcccagattgcccaggaacggaagaagacacagcaccaagtggatccagaggcc
aaggccaagaagaaacagccccagcctggaaaccagggtcccccgacatactgccggggg
gtgggcaagtatatcaaccctgcagccacaaaacgagcagcagaggaagaaccatccacc
agcacagccatccccacagtcaagaaaaggcccagtcggggctttggggacttcagctcc
tggtag
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