Rattus norvegicus (rat): 134479504
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Entry
134479504 CDS
T01003
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03018
RNA degradation
rno03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134479504
09123 Folding, sorting and degradation
03018 RNA degradation
134479504
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rno03019
]
134479504
03041 Spliceosome [BR:
rno03041
]
134479504
Messenger RNA biogenesis [BR:
rno03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
134479504
mRNA degradation factors
5'-3' decay
Lsm complex
134479504
Spliceosome [BR:
rno03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
134479504
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
134479504
NCBI-ProteinID:
XP_063118882
LinkDB
All DBs
Position
6:<110384966..110387028
Genome browser
AA seq
89 aa
AA seq
DB search
SYYNSNSFNLICPSAVFSTISRSLNFKKKRKKEIVGTLLGFDDFVNMVLEDVTEFEITPE
GRRITKLDQILLNGNNITMLVPGGEGPEV
NT seq
270 nt
NT seq
+upstream
nt +downstream
nt
agttattataacagtaattctttcaatttgatctgtccttcagctgtcttttctacaata
agccgctcgttaaattttaaaaaaaaaagaaagaaagaaatcgttggtacacttctagga
tttgatgactttgtcaatatggtgttggaagatgtcacagaatttgaaattacaccagaa
ggaagacgaattacaaaattagatcaaattctactaaacggaaataatataacaatgctg
gttcctggaggagaaggtcctgaagtatga
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